Bio-ToolBox v1.69 Perl 5 v5.24.1 x86_64-linux-ld
- Status
- Fail
- From
- Chris Williams (BINGOS)
- Dist
-
Bio-ToolBox v1.69
- Platform
- Perl 5 v5.24.1 x86_64-linux-ld
- Date
- 2022-09-27 06:09:32
- ID
- f41eb760-3e2a-11ed-8f4e-c962458f5e5b
This distribution has been tested as part of the CPAN Testers
project, supporting the Perl programming language. See
http://wiki.cpantesters.org/ for more information or email
questions to cpan-testers-discuss@perl.org
--
Dear TJPARNELL,
This is a computer-generated error report created automatically by
CPANPLUS, version 0.9914. Testers personal comments may appear
at the end of this report.
Thank you for uploading your work to CPAN. However, it appears that
there were some problems testing your distribution.
TEST RESULTS:
Below is the error stack from stage 'make test':
t/00.utility.t ......... ok
# Failed test 'require Bio::ToolBox::Data;'
# at t/01.Data.t line 15.
# Tried to require 'Bio::ToolBox::Data'.
# Error: "uniq" is not exported by the List::Util module
# Can't continue after import errors at /home/cpan/pit/bare-ld/conf/perl-5.24.1/.cpanplus/5.24.1/build/Mn9Nw6dm1_/Bio-ToolBox-1.69/blib/lib/Bio/ToolBox/db_helper.pm line 840.
# BEGIN failed--compilation aborted at /home/cpan/pit/bare-ld/conf/perl-5.24.1/.cpanplus/5.24.1/build/Mn9Nw6dm1_/Bio-ToolBox-1.69/blib/lib/Bio/ToolBox/db_helper.pm line 840.
# Compilation failed in require at /home/cpan/pit/bare-ld/conf/perl-5.24.1/.cpanplus/5.24.1/build/Mn9Nw6dm1_/Bio-ToolBox-1.69/blib/lib/Bio/ToolBox/Data/core.pm line 24.
# BEGIN failed--compilation aborted at /home/cpan/pit/bare-ld/conf/perl-5.24.1/.cpanplus/5.24.1/build/Mn9Nw6dm1_/Bio-ToolBox-1.69/blib/lib/Bio/ToolBox/Data/core.pm line 24.
# Compilation failed in require at /home/cpan/pit/bare-ld/perl-5.24.1/lib/5.24.1/base.pm line 100.
# ...propagated at /home/cpan/pit/bare-ld/perl-5.24.1/lib/5.24.1/base.pm line 109.
# BEGIN failed--compilation aborted at /home/cpan/pit/bare-ld/conf/perl-5.24.1/.cpanplus/5.24.1/build/Mn9Nw6dm1_/Bio-ToolBox-1.69/blib/lib/Bio/ToolBox/Data.pm line 1097.
# Compilation failed in require at (eval 8) line 2.
Bailout called. Further testing stopped: Cannot load Bio::ToolBox::Data
t/01.Data.t ............
Dubious, test returned 255 (wstat 65280, 0xff00)
Failed 224/224 subtests
FAILED--Further testing stopped: Cannot load Bio::ToolBox::Data
PREREQUISITES:
Here is a list of prerequisites you specified and versions we
managed to load:
Module Name Have Want
Config::Simple 4.58 4.58
File::Which 1.27 0
Getopt::Long 2.48 2.24
List::MoreUtils 0.430 0
List::Util 1.42_02 0
Module::Load 0.36 0
Statistics::Descriptive 3.0800 3
Statistics::Lite 3.62 3.2
Test::More 1.302190 0
Perl module toolchain versions installed:
Module Name Have
CPANPLUS 0.9914
CPANPLUS::Dist::Build 0.90
Cwd 3.75
ExtUtils::CBuilder 0.280236
ExtUtils::Command 7.64
ExtUtils::Install 2.20
ExtUtils::MakeMaker 7.64
ExtUtils::Manifest 1.73
ExtUtils::ParseXS 3.44
File::Spec 3.75
Module::Build 0.4231
Pod::Parser 1.63
Pod::Simple 3.32
Test2 1.302190
Test::Harness 3.44
Test::More 1.302190
version 0.9929
******************************** NOTE ********************************
The comments above are created mechanically, possibly without manual
checking by the sender. As there are many people performing automatic
tests on each upload to CPAN, it is likely that you will receive
identical messages about the same problem.
If you believe that the message is mistaken, please reply to the first
one with correction and/or additional informations, and do not take
it personally. We appreciate your patience. :)
**********************************************************************
Additional comments:
This report was machine-generated by CPANPLUS::Dist::YACSmoke 1.08.
Powered by minismokebox version 0.68
CPANPLUS is prefering Build.PL
------------------------------
ENVIRONMENT AND OTHER CONTEXT
------------------------------
Environment variables:
AUTOMATED_TESTING = 1
LANG = en_GB.UTF-8
LANGUAGE = en_GB:en
NONINTERACTIVE_TESTING = 1
PATH = /home/cpan/pit/bare-ld/conf/perl-5.24.1/.cpanplus/5.24.1/build/Mn9Nw6dm1_/Bio-ToolBox-1.69/blib/script:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/usr/local/games:/snap/bin
PERL5LIB = /home/cpan/pit/jail/MNJIPcFiN8/lib/perl5:/home/cpan/pit/bare-ld/conf/perl-5.24.1/.cpanplus/5.24.1/build/Mn9Nw6dm1_/Bio-ToolBox-1.69/blib/lib:/home/cpan/pit/bare-ld/conf/perl-5.24.1/.cpanplus/5.24.1/build/Mn9Nw6dm1_/Bio-ToolBox-1.69/blib/arch
PERL5_CPANPLUS_IS_RUNNING = 2725341
PERL5_CPANPLUS_IS_VERSION = 0.9914
PERL5_MINISMOKEBOX = 0.68
PERL5_YACSMOKE_BASE = /home/cpan/pit/bare-ld/conf/perl-5.24.1
PERL_EXTUTILS_AUTOINSTALL = --defaultdeps
PERL_LOCAL_LIB_ROOT = /home/cpan/pit/jail/MNJIPcFiN8
PERL_MB_OPT = --install_base "/home/cpan/pit/jail/MNJIPcFiN8"
PERL_MM_OPT = INSTALL_BASE=/home/cpan/pit/jail/MNJIPcFiN8
PERL_MM_USE_DEFAULT = 1
SHELL = /bin/bash
TERM = screen
Perl special variables (and OS-specific diagnostics, for MSWin32):
Perl: $^X = /home/cpan/pit/bare-ld/perl-5.24.1/bin/perl
UID: $< = 1001
EUID: $> = 1001
GID: $( = 1001 1001
EGID: $) = 1001 1001
-------------------------------
--
Summary of my perl5 (revision 5 version 24 subversion 1) configuration:
Platform:
osname=linux, osvers=5.4.0-26-generic, archname=x86_64-linux-ld
uname='linux uchder 5.4.0-26-generic #30-ubuntu smp mon apr 20 16:58:30 utc 2020 x86_64 x86_64 x86_64 gnulinux '
config_args='-des -Dprefix=/home/cpan/pit/bare-ld/perl-5.24.1 -Duselongdouble'
hint=recommended, useposix=true, d_sigaction=define
useithreads=undef, usemultiplicity=undef
use64bitint=define, use64bitall=define, uselongdouble=define
usemymalloc=n, bincompat5005=undef
Compiler:
cc='cc', ccflags ='-fwrapv -fno-strict-aliasing -pipe -fstack-protector-strong -I/usr/local/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64',
optimize='-O2',
cppflags='-fwrapv -fno-strict-aliasing -pipe -fstack-protector-strong -I/usr/local/include'
ccversion='', gccversion='9.3.0', gccosandvers=''
intsize=4, longsize=8, ptrsize=8, doublesize=8, byteorder=12345678, doublekind=3
d_longlong=define, longlongsize=8, d_longdbl=define, longdblsize=16, longdblkind=3
ivtype='long', ivsize=8, nvtype='long double', nvsize=16, Off_t='off_t', lseeksize=8
alignbytes=16, prototype=define
Linker and Libraries:
ld='cc', ldflags =' -fstack-protector-strong -L/usr/local/lib'
libpth=/usr/local/lib /usr/include/x86_64-linux-gnu /usr/lib /lib/x86_64-linux-gnu /lib/../lib /usr/lib/x86_64-linux-gnu /usr/lib/../lib /lib
libs=-lpthread -lnsl -lgdbm -ldl -lm -lcrypt -lutil -lc
perllibs=-lpthread -lnsl -ldl -lm -lcrypt -lutil -lc
libc=libc-2.31.so, so=so, useshrplib=false, libperl=libperl.a
gnulibc_version='2.31'
Dynamic Linking:
dlsrc=dl_dlopen.xs, dlext=so, d_dlsymun=undef, ccdlflags='-Wl,-E'
cccdlflags='-fPIC', lddlflags='-shared -O2 -L/usr/local/lib -fstack-protector-strong'
Characteristics of this binary (from libperl):
Compile-time options: HAS_TIMES PERLIO_LAYERS PERL_COPY_ON_WRITE
PERL_DONT_CREATE_GVSV
PERL_HASH_FUNC_ONE_AT_A_TIME_HARD PERL_MALLOC_WRAP
PERL_PRESERVE_IVUV USE_64_BIT_ALL USE_64_BIT_INT
USE_LARGE_FILES USE_LOCALE USE_LOCALE_COLLATE
USE_LOCALE_CTYPE USE_LOCALE_NUMERIC USE_LOCALE_TIME
USE_LONG_DOUBLE USE_PERLIO USE_PERL_ATOF
Locally applied patches:
Devel::PatchPerl 1.90
Built under linux
Compiled at Apr 27 2020 15:33:28
%ENV:
PERL5LIB="/home/cpan/pit/jail/MNJIPcFiN8/lib/perl5:/home/cpan/pit/bare-ld/conf/perl-5.24.1/.cpanplus/5.24.1/build/Mn9Nw6dm1_/Bio-ToolBox-1.69/blib/lib:/home/cpan/pit/bare-ld/conf/perl-5.24.1/.cpanplus/5.24.1/build/Mn9Nw6dm1_/Bio-ToolBox-1.69/blib/arch"
PERL5_CPANPLUS_IS_RUNNING="2725341"
PERL5_CPANPLUS_IS_VERSION="0.9914"
PERL5_MINISMOKEBOX="0.68"
PERL5_YACSMOKE_BASE="/home/cpan/pit/bare-ld/conf/perl-5.24.1"
PERL_EXTUTILS_AUTOINSTALL="--defaultdeps"
PERL_LOCAL_LIB_ROOT="/home/cpan/pit/jail/MNJIPcFiN8"
PERL_MB_OPT="--install_base "/home/cpan/pit/jail/MNJIPcFiN8""
PERL_MM_OPT="INSTALL_BASE=/home/cpan/pit/jail/MNJIPcFiN8"
PERL_MM_USE_DEFAULT="1"
@INC:
/home/cpan/pit/jail/MNJIPcFiN8/lib/perl5/5.24.1/x86_64-linux-ld
/home/cpan/pit/jail/MNJIPcFiN8/lib/perl5/5.24.1
/home/cpan/pit/jail/MNJIPcFiN8/lib/perl5/x86_64-linux-ld
/home/cpan/pit/jail/MNJIPcFiN8/lib/perl5
/home/cpan/pit/bare-ld/conf/perl-5.24.1/.cpanplus/5.24.1/build/Mn9Nw6dm1_/Bio-ToolBox-1.69/blib/lib
/home/cpan/pit/bare-ld/conf/perl-5.24.1/.cpanplus/5.24.1/build/Mn9Nw6dm1_/Bio-ToolBox-1.69/blib/arch
/home/cpan/pit/bare-ld/perl-5.24.1/lib/site_perl/5.24.1/x86_64-linux-ld
/home/cpan/pit/bare-ld/perl-5.24.1/lib/site_perl/5.24.1
/home/cpan/pit/bare-ld/perl-5.24.1/lib/5.24.1/x86_64-linux-ld
/home/cpan/pit/bare-ld/perl-5.24.1/lib/5.24.1
.