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From: metabase:user:314402c4-2aae-11df-837a-5e0a49663a4f
Subject: FAIL Bio-Draw-FeatureStack-0.03 v5.10.1 GNU/Linux
Date: 2014-09-09T19:10:25Z
This distribution has been tested as part of the CPAN Testers
project, supporting the Perl programming language. See
http://wiki.cpantesters.org/ for more information or email
questions to cpan-testers-discuss@perl.org
--
Dear Christian Frech,
This is a computer-generated report for Bio-Draw-FeatureStack-0.03
on perl 5.10.1, created by CPAN-Reporter-1.2011.
Thank you for uploading your work to CPAN. However, there was a problem
testing your distribution.
If you think this report is invalid, please consult the CPAN Testers Wiki
for suggestions on how to avoid getting FAIL reports for missing library
or binary dependencies, unsupported operating systems, and so on:
http://wiki.cpantesters.org/wiki/CPANAuthorNotes
Sections of this report:
* Tester comments
* Program output
* Prerequisites
* Environment and other context
------------------------------
TESTER COMMENTS
------------------------------
Additional comments from tester:
none provided
------------------------------
PROGRAM OUTPUT
------------------------------
Output from '/usr/bin/make test':
PERL_DL_NONLAZY=1 /bbbike/perl-5.10.1/bin/perl "-MExtUtils::Command::MM" "-MTest::Harness" "-e" "undef *Test::Harness::Switches; test_harness(0, 'blib/lib', 'blib/arch')" t/*.t
t/alt_feature.t ......... ok
t/basecase.t ............ ok
# Failed test 'Generation of feature_offset figures'
# at t/feature_offset.t line 19.
# died: Undefined subroutine &Bio::Graphics::Glyph::decorated_transcript::get_decorations_as_features called at /tmpfs/.cpan-build/Bio-Draw-FeatureStack-0.03-Ua6y2A/blib/lib/Bio/Draw/FeatureStack.pm line 439.
# Looks like you planned 11 tests but ran 6.
# Looks like you failed 1 test of 6 run.
t/feature_offset.t ......
Dubious, test returned 1 (wstat 256, 0x100)
Failed 6/11 subtests
# Failed test 'Generation of manuscript figure 1'
# at t/figures_manuscript.t line 17.
# died: Undefined subroutine &Bio::Graphics::Glyph::decorated_transcript::get_decorations_as_features called at /tmpfs/.cpan-build/Bio-Draw-FeatureStack-0.03-Ua6y2A/blib/lib/Bio/Draw/FeatureStack.pm line 439.
# Failed test 'Generation of manuscript figure 2'
# at t/figures_manuscript.t line 18.
# died: Can't locate object method "formatting" via package "GD::Font" at /home/eserte/.cpan/build/GD-SVG-0.33-3HaRNW/blib/lib/GD/SVG.pm line 996.
# Looks like you planned 27 tests but ran 15.
# Looks like you failed 2 tests of 15 run.
t/figures_manuscript.t ..
Dubious, test returned 2 (wstat 512, 0x200)
Failed 14/27 subtests
t/flip_minus.t .......... ok
t/genbank.t ............. ok
t/ignore_utr.t .......... ok
t/intron_size.t ......... ok
t/ruler.t ............... ok
t/seperator.t ........... ok
t/skip_transcript.t ..... ok
t/span.t ................ ok
Test Summary Report
-------------------
t/feature_offset.t (Wstat: 256 Tests: 6 Failed: 1)
Failed test: 6
Non-zero exit status: 1
Parse errors: Bad plan. You planned 11 tests but ran 6.
t/figures_manuscript.t (Wstat: 512 Tests: 15 Failed: 2)
Failed tests: 7-8
Non-zero exit status: 2
Parse errors: Bad plan. You planned 27 tests but ran 15.
Files=12, Tests=132, 14 wallclock secs ( 0.04 usr 0.07 sys + 5.38 cusr 0.86 csys = 6.35 CPU)
Result: FAIL
Failed 2/12 test programs. 3/132 subtests failed.
make: *** [test_dynamic] Error 255
------------------------------
PREREQUISITES
------------------------------
Prerequisite modules loaded:
requires:
Module Need Have
------------------------------------ ---- ----
Bio::Graphics 2.02 2.39
Bio::Graphics::Glyph::decorated_gene 0 0
GD::SVG 0.32 0.33
Test::Exception 0 0.32
build_requires:
Module Need Have
------------------------------------ ---- ----
ExtUtils::MakeMaker 0 6.98
------------------------------
ENVIRONMENT AND OTHER CONTEXT
------------------------------
Environment variables:
DBIC_NO_WARN_BAD_PERL = 1
LANG = C
PATH = /usr/local/bin:/usr/bin:/bin:/usr/local/sbin:/usr/sbin:/sbin:/home/eserte/bin/linux-gnu:/home/eserte/bin/sh:/home/eserte/bin:/usr/games:/home/eserte/devel:/home/eserte/src/srezic-misc/scripts
PERL5LIB = /home/eserte/.cpan/build/GD-SVG-0.33-3HaRNW/blib/arch:/home/eserte/.cpan/build/GD-SVG-0.33-3HaRNW/blib/lib:/home/eserte/.cpan/build/SVG-2.59-knKvp_/blib/arch:/home/eserte/.cpan/build/SVG-2.59-knKvp_/blib/lib
PERL5OPT =
PERL5_CPANPLUS_IS_RUNNING = 26619
PERL5_CPAN_IS_RUNNING = 26619
PERL5_CPAN_IS_RUNNING_IN_RECURSION = 21082,26619
PERLDOC = -MPod::Perldoc::ToTextOverstrike
PERL_BATCH = yes
PERL_CPAN_REPORTER_CONFIG = /var/tmp/cpansmoker-1001/UT8v6zY4I5_config.ini
PERL_EXTUTILS_AUTOINSTALL = --defaultdeps
PERL_HTML_DISPLAY_CLASS = HTML::Display::Mozilla
SHELL = /bin/zsh
TERM = screen
TMPDIR = /var/tmp/cpansmoker-1001
Perl special variables (and OS-specific diagnostics, for MSWin32):
$^X = /bbbike/perl-5.10.1/bin/perl
$UID/$EUID = 1001 / 1001
$GID = 1001 109 1001
$EGID = 1001 109 1001
Perl module toolchain versions installed:
Module Have
------------------- --------
CPAN 1.9402
CPAN::Meta 2.142060
Cwd 3.47
ExtUtils::CBuilder 0.280219
ExtUtils::Command 1.16
ExtUtils::Install 1.54
ExtUtils::MakeMaker 6.98
ExtUtils::Manifest 1.65
ExtUtils::ParseXS 3.24
File::Spec 3.47
JSON 2.90
JSON::PP 2.27203
Module::Build 0.4210
Module::Signature 0.73
Parse::CPAN::Meta 1.4414
Test::Harness 3.33
Test::More 1.001003
YAML 1.11
YAML::Syck 1.27
version 0.9909
--
Summary of my perl5 (revision 5 version 10 subversion 1) configuration:
Platform:
osname=linux, osvers=3.2.0-4-amd64, archname=x86_64-linux
uname='linux eserte 3.2.0-4-amd64 #1 smp debian 3.2.60-1+deb7u3 x86_64 gnulinux '
config_args='-ds -e -Dprefix=/opt/perl-5.10.1'
hint=recommended, useposix=true, d_sigaction=define
useithreads=undef, usemultiplicity=undef
useperlio=define, d_sfio=undef, uselargefiles=define, usesocks=undef
use64bitint=define, use64bitall=define, uselongdouble=undef
usemymalloc=n, bincompat5005=undef
Compiler:
cc='cc', ccflags ='-fno-strict-aliasing -pipe -fstack-protector -I/usr/local/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64',
optimize='-O2',
cppflags='-fno-strict-aliasing -pipe -fstack-protector -I/usr/local/include'
ccversion='', gccversion='4.7.2', gccosandvers=''
intsize=4, longsize=8, ptrsize=8, doublesize=8, byteorder=12345678
d_longlong=define, longlongsize=8, d_longdbl=define, longdblsize=16
ivtype='long', ivsize=8, nvtype='double', nvsize=8, Off_t='off_t', lseeksize=8
alignbytes=8, prototype=define
Linker and Libraries:
ld='cc', ldflags =' -fstack-protector -L/usr/local/lib'
libpth=/usr/local/lib /lib/x86_64-linux-gnu /lib/../lib /usr/lib/x86_64-linux-gnu /usr/lib/../lib /lib /usr/lib
libs=-lnsl -ldb -ldl -lm -lcrypt -lutil -lc
perllibs=-lnsl -ldl -lm -lcrypt -lutil -lc
libc=libc-2.13.so, so=so, useshrplib=false, libperl=libperl.a
gnulibc_version='2.13'
Dynamic Linking:
dlsrc=dl_dlopen.xs, dlext=so, d_dlsymun=undef, ccdlflags='-Wl,-E'
cccdlflags='-fPIC', lddlflags='-shared -O2 -L/usr/local/lib -fstack-protector'
Characteristics of this binary (from libperl):
Compile-time options: PERL_DONT_CREATE_GVSV PERL_MALLOC_WRAP USE_64_BIT_ALL
USE_64_BIT_INT USE_LARGE_FILES USE_PERLIO
Built under linux
Compiled at Aug 18 2014 20:38:33
%ENV:
PERL5LIB="/home/eserte/.cpan/build/GD-SVG-0.33-3HaRNW/blib/arch:/home/eserte/.cpan/build/GD-SVG-0.33-3HaRNW/blib/lib:/home/eserte/.cpan/build/SVG-2.59-knKvp_/blib/arch:/home/eserte/.cpan/build/SVG-2.59-knKvp_/blib/lib"
PERL5OPT=""
PERL5_CPANPLUS_IS_RUNNING="26619"
PERL5_CPAN_IS_RUNNING="26619"
PERL5_CPAN_IS_RUNNING_IN_RECURSION="21082,26619"
PERLDOC="-MPod::Perldoc::ToTextOverstrike"
PERL_BATCH="yes"
PERL_CPAN_REPORTER_CONFIG="/var/tmp/cpansmoker-1001/UT8v6zY4I5_config.ini"
PERL_EXTUTILS_AUTOINSTALL="--defaultdeps"
PERL_HTML_DISPLAY_CLASS="HTML::Display::Mozilla"
@INC:
/home/eserte/.cpan/build/GD-SVG-0.33-3HaRNW/blib/arch
/home/eserte/.cpan/build/GD-SVG-0.33-3HaRNW/blib/lib
/home/eserte/.cpan/build/SVG-2.59-knKvp_/blib/arch
/home/eserte/.cpan/build/SVG-2.59-knKvp_/blib/lib
/opt/perl-5.10.1/lib/5.10.1/x86_64-linux
/opt/perl-5.10.1/lib/5.10.1
/opt/perl-5.10.1/lib/site_perl/5.10.1/x86_64-linux
/opt/perl-5.10.1/lib/site_perl/5.10.1
.