Back
From: metabase:user:322078bc-2aae-11df-837a-5e0a49663a4f
Subject: FAIL Bio-Das-Lite-2.11 v5.16.1 GNU/Linux
Date: 2012-10-14T19:03:10Z
This distribution has been tested as part of the CPAN Testers
project, supporting the Perl programming language. See
http://wiki.cpantesters.org/ for more information or email
questions to cpan-testers-discuss@perl.org
--
Dear RPETTETT,
This is a computer-generated error report created automatically by
CPANPLUS, version 0.9133. Testers personal comments may appear
at the end of this report.
Thank you for uploading your work to CPAN. However, it appears that
there were some problems testing your distribution.
TEST RESULTS:
Below is the error stack from stage 'make test':
t/00-critic.t ............... skipped: Author test. Set $ENV{TEST_AUTHOR} to a true value to run.
t/00-distribution.t ......... skipped: Test::Distribution not installed
t/00-pod.t .................. skipped: Test::Pod 1.00 required for testing POD
t/00-podcoverage.t .......... skipped: Test::Pod::Coverage 1.00 required for testing POD coverage
t/01-general.t .............. ok
t/02-statuscodes.t .......... ok
# Failed test 'dsns call returned OK status (service http://das.ensembl.org/das/dsn status 404 Not Found)'
# at t/05-singledsn.t line 38.
# Failed test 'dsns call gave a arrayref value (service http://das.ensembl.org/das/dsn)'
# at t/05-singledsn.t line 39.
# Failed test 'dsns call returned at least one source (service http://das.ensembl.org/das/dsn)'
# at t/05-singledsn.t line 41.
# Failed test 'dsns call returned OK status (service http://das.ensembl.org/das/dsn\#foo status 404 Not Found)'
# at t/05-singledsn.t line 38.
# Failed test 'dsns call gave a arrayref value (service http://das.ensembl.org/das/dsn\#foo)'
# at t/05-singledsn.t line 39.
# Failed test 'dsns call returned at least one source (service http://das.ensembl.org/das/dsn\#foo)'
# at t/05-singledsn.t line 41.
# Looks like you failed 6 tests of 33.
t/05-singledsn.t ............
Dubious, test returned 6 (wstat 1536, 0x600)
Failed 6/33 subtests
t/06-singledsn-singleseg.t .. ok
t/07-singledsn-multiseg.t ... ok
# Failed test 'dsns call returned OK status (status is 404 Not Found)'
# at t/10-multidsn.t line 34.
# Failed test 'dsns call gave a arrayref value for the one key'
# at t/10-multidsn.t line 36.
Can't use an undefined value as an ARRAY reference at t/10-multidsn.t line 38.
# Looks like you planned 11 tests but ran 9.
# Looks like you failed 2 tests of 9 run.
# Looks like your test exited with 115 just after 9.
t/10-multidsn.t .............
Dubious, test returned 115 (wstat 29440, 0x7300)
Failed 4/11 subtests
t/20-authentication.t ....... ok
t/21-proxy.t ................ skipped: Proxy testing requires POE and WWW::Curl::Simple
t/40-dna.t .................. ok
t/45-sequence.t ............. ok
t/50-entry_points.t ......... ok
t/60-features.t ............. ok
t/60-features_chunked.t ..... ok
t/60-features_empty.t ....... ok
t/61-features_group.t ....... ok
t/70-alignment.t ............ ok
t/80-structure.t ............ ok
t/90-sources.t .............. ok
Test Summary Report
-------------------
t/05-singledsn.t (Wstat: 1536 Tests: 33 Failed: 6)
Failed tests: 19-21, 30-32
Non-zero exit status: 6
t/10-multidsn.t (Wstat: 29440 Tests: 9 Failed: 2)
Failed tests: 8-9
Non-zero exit status: 115
Parse errors: Bad plan. You planned 11 tests but ran 9.
Files=22, Tests=113, 5 wallclock secs ( 0.07 usr 0.03 sys + 2.51 cusr 0.62 csys = 3.23 CPU)
Result: FAIL
Failed 2/22 test programs. 8/113 subtests failed.
BEGIN failed--compilation aborted at -e line 1.
PREREQUISITES:
Here is a list of prerequisites you specified and versions we
managed to load:
Module Name Have Want
Carp 1.26 1.02
English 1.05 1.01
HTTP::Response 6.04 1.49
Readonly 1.03 1.03
Test::More 0.98 0.8
WWW::Curl 4.15 4.07
Perl module toolchain versions installed:
Module Name Have
CPANPLUS 0.9133
CPANPLUS::Dist::Build 0.62
Cwd 3.39_02
ExtUtils::CBuilder 0.280206
ExtUtils::Command 1.17
ExtUtils::Install 1.58
ExtUtils::MakeMaker 6.63_02
ExtUtils::Manifest 1.61
ExtUtils::ParseXS 3.16
File::Spec 3.39_02
Module::Build 0.4003
Pod::Parser 1.51
Pod::Simple 3.20
Test::Harness 3.25
Test::More 0.98
version 0.9901
******************************** NOTE ********************************
The comments above are created mechanically, possibly without manual
checking by the sender. As there are many people performing automatic
tests on each upload to CPAN, it is likely that you will receive
identical messages about the same problem.
If you believe that the message is mistaken, please reply to the first
one with correction and/or additional informations, and do not take
it personally. We appreciate your patience. :)
**********************************************************************
Additional comments:
This report was machine-generated by CPANPLUS::Dist::YACSmoke 0.84.
Powered by minismokebox version 0.54
------------------------------
ENVIRONMENT AND OTHER CONTEXT
------------------------------
Environment variables:
AUTOMATED_TESTING = 1
LANG = en_GB.UTF-8
LANGUAGE = en_GB:en
PATH = /usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games
PERL5LIB = :/home/cpan/pit/bare/conf/perl-5.16.1/.cpanplus/5.16.1/build/Encode-Locale-1.03/blib/lib:/home/cpan/pit/bare/conf/perl-5.16.1/.cpanplus/5.16.1/build/Encode-Locale-1.03/blib/arch:/home/cpan/pit/bare/conf/perl-5.16.1/.cpanplus/5.16.1/build/HTTP-Date-6.02/blib/lib:/home/cpan/pit/bare/conf/perl-5.16.1/.cpanplus/5.16.1/build/HTTP-Date-6.02/blib/arch:/home/cpan/pit/bare/conf/perl-5.16.1/.cpanplus/5.16.1/build/IO-HTML-0.04/blib/lib:/home/cpan/pit/bare/conf/perl-5.16.1/.cpanplus/5.16.1/build/IO-HTML-0.04/blib/arch:/home/cpan/pit/bare/conf/perl-5.16.1/.cpanplus/5.16.1/build/LWP-MediaTypes-6.02/blib/lib:/home/cpan/pit/bare/conf/perl-5.16.1/.cpanplus/5.16.1/build/LWP-MediaTypes-6.02/blib/arch:/home/cpan/pit/bare/conf/perl-5.16.1/.cpanplus/5.16.1/build/URI-1.60/blib/lib:/home/cpan/pit/bare/conf/perl-5.16.1/.cpanplus/5.16.1/build/URI-1.60/blib/arch:/home/cpan/pit/bare/conf/perl-5.16.1/.cpanplus/5.16.1/build/HTTP-Message-6.04/blib/lib:/home/cpan/pit/bare/conf/perl-5.16.1/.cpanplus/5.16.1/build/HTTP-Message-6.04/blib/arch:/home/cpan/pit/bare/conf/perl-5.16.1/.cpanplus/5.16.1/build/Readonly-1.03/blib/lib:/home/cpan/pit/bare/conf/perl-5.16.1/.cpanplus/5.16.1/build/Readonly-1.03/blib/arch:/home/cpan/pit/bare/conf/perl-5.16.1/.cpanplus/5.16.1/build/WWW-Curl-4.15/blib/lib:/home/cpan/pit/bare/conf/perl-5.16.1/.cpanplus/5.16.1/build/WWW-Curl-4.15/blib/arch:/home/cpan/pit/bare/conf/perl-5.16.1/.cpanplus/5.16.1/build/Bio-Das-Lite-2.11/blib/lib:/home/cpan/pit/bare/conf/perl-5.16.1/.cpanplus/5.16.1/build/Bio-Das-Lite-2.11/blib/arch
PERL5_CPANPLUS_IS_RUNNING = 10381
PERL5_CPANPLUS_IS_VERSION = 0.9133
PERL5_MINISMOKEBOX = 0.54
PERL5_YACSMOKE_BASE = /home/cpan/pit/bare/conf/perl-5.16.1
PERL_EXTUTILS_AUTOINSTALL = --defaultdeps
PERL_MM_USE_DEFAULT = 1
SHELL = /bin/bash
TERM = screen
Perl special variables (and OS-specific diagnostics, for MSWin32):
Perl: $^X = /home/cpan/pit/bare/perl-5.16.1/bin/perl
UID: $< = 1001
EUID: $> = 1001
GID: $( = 1001 1001
EGID: $) = 1001 1001
-------------------------------
--
Summary of my perl5 (revision 5 version 16 subversion 1) configuration:
Platform:
osname=linux, osvers=3.2.0-27-generic, archname=x86_64-linux
uname='linux pluto 3.2.0-27-generic #43-ubuntu smp fri jul 6 14:25:57 utc 2012 x86_64 x86_64 x86_64 gnulinux '
config_args='-des -Dprefix=/home/cpan/pit/bare/perl-5.16.1'
hint=recommended, useposix=true, d_sigaction=define
useithreads=undef, usemultiplicity=undef
useperlio=define, d_sfio=undef, uselargefiles=define, usesocks=undef
use64bitint=define, use64bitall=define, uselongdouble=undef
usemymalloc=n, bincompat5005=undef
Compiler:
cc='cc', ccflags ='-fno-strict-aliasing -pipe -fstack-protector -I/usr/local/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64',
optimize='-O2',
cppflags='-fno-strict-aliasing -pipe -fstack-protector -I/usr/local/include'
ccversion='', gccversion='4.6.3', gccosandvers=''
intsize=4, longsize=8, ptrsize=8, doublesize=8, byteorder=12345678
d_longlong=define, longlongsize=8, d_longdbl=define, longdblsize=16
ivtype='long', ivsize=8, nvtype='double', nvsize=8, Off_t='off_t', lseeksize=8
alignbytes=8, prototype=define
Linker and Libraries:
ld='cc', ldflags =' -fstack-protector -L/usr/local/lib'
libpth=/usr/local/lib /lib/x86_64-linux-gnu /lib/../lib /usr/lib/x86_64-linux-gnu /usr/lib/../lib /lib /usr/lib
libs=-lnsl -lgdbm -ldb -ldl -lm -lcrypt -lutil -lc -lgdbm_compat
perllibs=-lnsl -ldl -lm -lcrypt -lutil -lc
libc=, so=so, useshrplib=false, libperl=libperl.a
gnulibc_version='2.15'
Dynamic Linking:
dlsrc=dl_dlopen.xs, dlext=so, d_dlsymun=undef, ccdlflags='-Wl,-E'
cccdlflags='-fPIC', lddlflags='-shared -O2 -L/usr/local/lib -fstack-protector'
Characteristics of this binary (from libperl):
Compile-time options: HAS_TIMES PERLIO_LAYERS PERL_DONT_CREATE_GVSV
PERL_MALLOC_WRAP PERL_PRESERVE_IVUV USE_64_BIT_ALL
USE_64_BIT_INT USE_LARGE_FILES USE_LOCALE
USE_LOCALE_COLLATE USE_LOCALE_CTYPE
USE_LOCALE_NUMERIC USE_PERLIO USE_PERL_ATOF
Built under linux
Compiled at Aug 9 2012 00:47:37
%ENV:
PERL5LIB=":/home/cpan/pit/bare/conf/perl-5.16.1/.cpanplus/5.16.1/build/Encode-Locale-1.03/blib/lib:/home/cpan/pit/bare/conf/perl-5.16.1/.cpanplus/5.16.1/build/Encode-Locale-1.03/blib/arch:/home/cpan/pit/bare/conf/perl-5.16.1/.cpanplus/5.16.1/build/HTTP-Date-6.02/blib/lib:/home/cpan/pit/bare/conf/perl-5.16.1/.cpanplus/5.16.1/build/HTTP-Date-6.02/blib/arch:/home/cpan/pit/bare/conf/perl-5.16.1/.cpanplus/5.16.1/build/IO-HTML-0.04/blib/lib:/home/cpan/pit/bare/conf/perl-5.16.1/.cpanplus/5.16.1/build/IO-HTML-0.04/blib/arch:/home/cpan/pit/bare/conf/perl-5.16.1/.cpanplus/5.16.1/build/LWP-MediaTypes-6.02/blib/lib:/home/cpan/pit/bare/conf/perl-5.16.1/.cpanplus/5.16.1/build/LWP-MediaTypes-6.02/blib/arch:/home/cpan/pit/bare/conf/perl-5.16.1/.cpanplus/5.16.1/build/URI-1.60/blib/lib:/home/cpan/pit/bare/conf/perl-5.16.1/.cpanplus/5.16.1/build/URI-1.60/blib/arch:/home/cpan/pit/bare/conf/perl-5.16.1/.cpanplus/5.16.1/build/HTTP-Message-6.04/blib/lib:/home/cpan/pit/bare/conf/perl-5.16.1/.cpanplus/5.16.1/build/HTTP-Message-6.04/blib/arch:/home/cpan/pit/bare/conf/perl-5.16.1/.cpanplus/5.16.1/build/Readonly-1.03/blib/lib:/home/cpan/pit/bare/conf/perl-5.16.1/.cpanplus/5.16.1/build/Readonly-1.03/blib/arch:/home/cpan/pit/bare/conf/perl-5.16.1/.cpanplus/5.16.1/build/WWW-Curl-4.15/blib/lib:/home/cpan/pit/bare/conf/perl-5.16.1/.cpanplus/5.16.1/build/WWW-Curl-4.15/blib/arch:/home/cpan/pit/bare/conf/perl-5.16.1/.cpanplus/5.16.1/build/Bio-Das-Lite-2.11/blib/lib:/home/cpan/pit/bare/conf/perl-5.16.1/.cpanplus/5.16.1/build/Bio-Das-Lite-2.11/blib/arch"
PERL5_CPANPLUS_IS_RUNNING="10381"
PERL5_CPANPLUS_IS_VERSION="0.9133"
PERL5_MINISMOKEBOX="0.54"
PERL5_YACSMOKE_BASE="/home/cpan/pit/bare/conf/perl-5.16.1"
PERL_EXTUTILS_AUTOINSTALL="--defaultdeps"
PERL_MM_USE_DEFAULT="1"
@INC:
/home/cpan/pit/bare/conf/perl-5.16.1/.cpanplus/5.16.1/build/Encode-Locale-1.03/blib/lib
/home/cpan/pit/bare/conf/perl-5.16.1/.cpanplus/5.16.1/build/Encode-Locale-1.03/blib/arch
/home/cpan/pit/bare/conf/perl-5.16.1/.cpanplus/5.16.1/build/HTTP-Date-6.02/blib/lib
/home/cpan/pit/bare/conf/perl-5.16.1/.cpanplus/5.16.1/build/HTTP-Date-6.02/blib/arch
/home/cpan/pit/bare/conf/perl-5.16.1/.cpanplus/5.16.1/build/IO-HTML-0.04/blib/lib
/home/cpan/pit/bare/conf/perl-5.16.1/.cpanplus/5.16.1/build/IO-HTML-0.04/blib/arch
/home/cpan/pit/bare/conf/perl-5.16.1/.cpanplus/5.16.1/build/LWP-MediaTypes-6.02/blib/lib
/home/cpan/pit/bare/conf/perl-5.16.1/.cpanplus/5.16.1/build/LWP-MediaTypes-6.02/blib/arch
/home/cpan/pit/bare/conf/perl-5.16.1/.cpanplus/5.16.1/build/URI-1.60/blib/lib
/home/cpan/pit/bare/conf/perl-5.16.1/.cpanplus/5.16.1/build/URI-1.60/blib/arch
/home/cpan/pit/bare/conf/perl-5.16.1/.cpanplus/5.16.1/build/HTTP-Message-6.04/blib/lib
/home/cpan/pit/bare/conf/perl-5.16.1/.cpanplus/5.16.1/build/HTTP-Message-6.04/blib/arch
/home/cpan/pit/bare/conf/perl-5.16.1/.cpanplus/5.16.1/build/Readonly-1.03/blib/lib
/home/cpan/pit/bare/conf/perl-5.16.1/.cpanplus/5.16.1/build/Readonly-1.03/blib/arch
/home/cpan/pit/bare/conf/perl-5.16.1/.cpanplus/5.16.1/build/WWW-Curl-4.15/blib/lib
/home/cpan/pit/bare/conf/perl-5.16.1/.cpanplus/5.16.1/build/WWW-Curl-4.15/blib/arch
/home/cpan/pit/bare/conf/perl-5.16.1/.cpanplus/5.16.1/build/Bio-Das-Lite-2.11/blib/lib
/home/cpan/pit/bare/conf/perl-5.16.1/.cpanplus/5.16.1/build/Bio-Das-Lite-2.11/blib/arch
/home/cpan/pit/bare/perl-5.16.1/lib/site_perl/5.16.1/x86_64-linux
/home/cpan/pit/bare/perl-5.16.1/lib/site_perl/5.16.1
/home/cpan/pit/bare/perl-5.16.1/lib/5.16.1/x86_64-linux
/home/cpan/pit/bare/perl-5.16.1/lib/5.16.1
.