Convert-Pheno v0.27 Perl 5 v5.38.3 x86_64-linux-thread-multi
- Status
- Pass
- From
- Andreas J. König (ANDK)
- Dist
-
Convert-Pheno v0.27
- Platform
- Perl 5 v5.38.3 x86_64-linux-thread-multi
- Date
- 2025-01-22 23:50:54
- ID
- b7f3b252-d91b-11ef-a289-d1d07bd4d197
This distribution has been tested as part of the CPAN Testers
project, supporting the Perl programming language. See
http://wiki.cpantesters.org/ for more information or email
questions to cpan-testers-discuss@perl.org
--
Dear Manuel Rueda,
This is a computer-generated report for Convert-Pheno-0.27
on perl 5.38.3, created by CPAN-Reporter-1.2020.
Thank you for uploading your work to CPAN. Congratulations!
All tests were successful.
Sections of this report:
* Tester comments
* Program output
* Prerequisites
* Environment and other context
------------------------------
TESTER COMMENTS
------------------------------
Additional comments from tester:
this report is from an automated smoke testing program
and was not reviewed by a human for accuracy
------------------------------
PROGRAM OUTPUT
------------------------------
Output from '/usr/bin/make test':
Skip blib/lib/auto/share/dist/Convert-Pheno/db/hpo.db (unchanged)
Skip blib/lib/auto/share/dist/Convert-Pheno/db/README (unchanged)
Skip blib/lib/auto/share/dist/Convert-Pheno/schema/mapping.json (unchanged)
Skip blib/lib/auto/share/dist/Convert-Pheno/ex/perl.pl (unchanged)
Skip blib/lib/auto/share/dist/Convert-Pheno/db/icd10.db (unchanged)
Skip blib/lib/auto/share/dist/Convert-Pheno/db/cdisc.db (unchanged)
Skip blib/lib/auto/share/dist/Convert-Pheno/db/ncit.db (unchanged)
Skip blib/lib/auto/share/dist/Convert-Pheno/db/omim.db (unchanged)
Skip blib/lib/auto/share/dist/Convert-Pheno/db/concepts_candidates_2_exposure.csv (unchanged)
Skip blib/lib/auto/share/dist/Convert-Pheno/ex/python.py (unchanged)
PERL_DL_NONLAZY=1 "/tmp/basesmoker-reloperl-aFHk/bin/perl" "-MExtUtils::Command::MM" "-MTest::Harness" "-e" "undef *Test::Harness::Switches; test_harness(0, 'blib/lib', 'blib/arch')" t/*.t
t/args.t ..... ok
t/cli.t ...... ok
t/mapping.t .. ok
t/module.t ... ok
t/stream.t ... ok
All tests successful.
Files=5, Tests=33, 19 wallclock secs ( 0.02 usr 0.01 sys + 15.97 cusr 0.65 csys = 16.65 CPU)
Result: PASS
------------------------------
PREREQUISITES
------------------------------
Prerequisite modules loaded:
requires:
Module Need Have
------------------------------ -------- --------
Data::Leaf::Walker 0.21 0.21
DBD::SQLite 1.72 1.76
DBI 1.643 1.647
Devel::Size 0.84 0.84
File::ShareDir::ProjectDistDir 1.000009 1.000009
Hash::Fold v1.0.0 v1.0.0
JSON::Validator 5.14 5.14
JSON::XS 4.03 4.03
! JSONLD 0.006 n/a
Mojolicious 9.33 9.39
Moo 2.005005 2.005005
Path::Tiny 0.144 0.146
perl 5.026000 5.038003
Sort::Naturally 1.03 1.03
Term::ANSIColor 5.01 5.01
Text::CSV_XS 1.50 1.59
Text::Similarity 0.13 0.13
Types::Standard 2.004000 2.006000
XML::Fast 0.17 0.17
YAML::XS 0.88 v0.902.0
build_requires:
Module Need Have
------------------------------ -------- --------
ExtUtils::MakeMaker 0 7.70
Test::Deep 1.204 1.204
Test::Exception 0.43 0.43
Test::More 1.30 1.302207
Test::Warn 0.37 0.37
configure_requires:
Module Need Have
------------------------------ -------- --------
ExtUtils::MakeMaker 7.70 7.70
File::ShareDir::Install 0.14 0.14
------------------------------
ENVIRONMENT AND OTHER CONTEXT
------------------------------
Environment variables:
AUTOMATED_TESTING = 1
LANG = en_US.UTF-8
PATH = /home/sand/bin:/usr/local/bin:/usr/local/sbin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/usr/local/games:/snap/bin:/usr/local/perl/bin:/usr/X11/bin
PERL = /tmp/basesmoker-reloperl-aFHk/bin/perl
PERL5LIB = /tmp/loop_over_bdir-641295-BGeEVH/RDF-NLP-SPARQLQuery-0.1-0/blib/arch:/tmp/loop_over_bdir-641295-BGeEVH/RDF-NLP-SPARQLQuery-0.1-0/blib/lib
PERL5OPT =
PERL5_CPANPLUS_IS_RUNNING = 641303
PERL5_CPAN_IS_RUNNING = 641303
PERL_CANARY_STABILITY_NOPROMPT = 1
PERL_MM_USE_DEFAULT = 1
PERL_USE_UNSAFE_INC = 1
SHELL = /usr/bin/zsh
TERM = screen
Perl special variables (and OS-specific diagnostics, for MSWin32):
$^X = /tmp/basesmoker-reloperl-aFHk/bin/perl
$UID/$EUID = 1005 / 1005
$GID = 1005 1005
$EGID = 1005 1005
Perl module toolchain versions installed:
Module Have
------------------- --------
CPAN 2.38
CPAN::Meta 2.150010
Cwd 3.89
ExtUtils::CBuilder 0.280238
ExtUtils::Command 7.70
ExtUtils::Install 2.22
ExtUtils::MakeMaker 7.70
ExtUtils::Manifest 1.73
ExtUtils::ParseXS 3.51
File::Spec 3.88
JSON 4.10
JSON::PP 4.16
Module::Build 0.4234
Module::Signature 0.89
Parse::CPAN::Meta 2.150010
Test2 1.302207
Test::Harness 3.50
Test::More 1.302207
YAML 1.31
YAML::Syck 1.34
version 0.9933
--
Summary of my perl5 (revision 5 version 38 subversion 3) configuration:
Commit id: 06697759559c52236e296a256776b1222f228163
Platform:
osname=linux
osvers=5.4.0-204-generic
archname=x86_64-linux-thread-multi
uname='linux k93focal 5.4.0-204-generic #224-ubuntu smp thu dec 5 13:38:28 utc 2024 x86_64 x86_64 x86_64 gnulinux '
config_args='-Dprefix=/home/sand/src/perl/repoperls/installed-perls/host/k93focal/v5.38.3/d119 -Dmyhostname=k93focal -Dinstallusrbinperl=n -Uversiononly -Dusedevel -des -Ui_db -Dlibswanted=cl pthread socket inet nsl gdbm dbm malloc dl ld sun m crypt sec util c cposix posix ucb BSD gdbm_compat -Duseithreads -Uuselongdouble -DEBUGGING=both'
hint=recommended
useposix=true
d_sigaction=define
useithreads=define
usemultiplicity=define
use64bitint=define
use64bitall=define
uselongdouble=undef
usemymalloc=n
default_inc_excludes_dot=define
Compiler:
cc='cc'
ccflags ='-D_REENTRANT -D_GNU_SOURCE -fwrapv -DDEBUGGING -fno-strict-aliasing -pipe -fstack-protector-strong -I/usr/local/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64'
optimize='-O2 -g'
cppflags='-D_REENTRANT -D_GNU_SOURCE -fwrapv -DDEBUGGING -fno-strict-aliasing -pipe -fstack-protector-strong -I/usr/local/include'
ccversion=''
gccversion='9.4.0'
gccosandvers=''
intsize=4
longsize=8
ptrsize=8
doublesize=8
byteorder=12345678
doublekind=3
d_longlong=define
longlongsize=8
d_longdbl=define
longdblsize=16
longdblkind=3
ivtype='long'
ivsize=8
nvtype='double'
nvsize=8
Off_t='off_t'
lseeksize=8
alignbytes=8
prototype=define
Linker and Libraries:
ld='cc'
ldflags =' -fstack-protector-strong -L/usr/local/lib'
libpth=/usr/local/lib /usr/lib/x86_64-linux-gnu /usr/lib /usr/lib64
libs=-lpthread -lnsl -ldl -lm -lcrypt -lutil -lc
perllibs=-lpthread -lnsl -ldl -lm -lcrypt -lutil -lc
libc=libc-2.31.so
so=so
useshrplib=false
libperl=libperl.a
gnulibc_version='2.31'
Dynamic Linking:
dlsrc=dl_dlopen.xs
dlext=so
d_dlsymun=undef
ccdlflags='-Wl,-E'
cccdlflags='-fPIC'
lddlflags='-shared -O2 -g -L/usr/local/lib -fstack-protector-strong'
Characteristics of this binary (from libperl):
Compile-time options:
DEBUGGING
HAS_LONG_DOUBLE
HAS_STRTOLD
HAS_TIMES
MULTIPLICITY
PERLIO_LAYERS
PERL_COPY_ON_WRITE
PERL_DONT_CREATE_GVSV
PERL_HASH_FUNC_SIPHASH13
PERL_HASH_USE_SBOX32
PERL_MALLOC_WRAP
PERL_OP_PARENT
PERL_PRESERVE_IVUV
PERL_TRACK_MEMPOOL
PERL_USE_DEVEL
PERL_USE_SAFE_PUTENV
USE_64_BIT_ALL
USE_64_BIT_INT
USE_ITHREADS
USE_LARGE_FILES
USE_LOCALE
USE_LOCALE_COLLATE
USE_LOCALE_CTYPE
USE_LOCALE_NUMERIC
USE_LOCALE_TIME
USE_PERLIO
USE_PERL_ATOF
USE_REENTRANT_API
USE_THREAD_SAFE_LOCALE
Built under linux
Compiled at Jan 20 2025 16:12:56
%ENV:
PERL="/tmp/basesmoker-reloperl-aFHk/bin/perl"
PERL5LIB="/tmp/loop_over_bdir-641295-BGeEVH/RDF-NLP-SPARQLQuery-0.1-0/blib/arch:/tmp/loop_over_bdir-641295-BGeEVH/RDF-NLP-SPARQLQuery-0.1-0/blib/lib"
PERL5OPT=""
PERL5_CPANPLUS_IS_RUNNING="641303"
PERL5_CPAN_IS_RUNNING="641303"
PERL_CANARY_STABILITY_NOPROMPT="1"
PERL_MM_USE_DEFAULT="1"
PERL_USE_UNSAFE_INC="1"
@INC:
/tmp/loop_over_bdir-641295-BGeEVH/RDF-NLP-SPARQLQuery-0.1-0/blib/arch
/tmp/loop_over_bdir-641295-BGeEVH/RDF-NLP-SPARQLQuery-0.1-0/blib/lib
/home/sand/src/perl/repoperls/installed-perls/host/k93focal/v5.38.3/d119/lib/site_perl/5.38.3/x86_64-linux-thread-multi
/home/sand/src/perl/repoperls/installed-perls/host/k93focal/v5.38.3/d119/lib/site_perl/5.38.3
/home/sand/src/perl/repoperls/installed-perls/host/k93focal/v5.38.3/d119/lib/5.38.3/x86_64-linux-thread-multi
/home/sand/src/perl/repoperls/installed-perls/host/k93focal/v5.38.3/d119/lib/5.38.3
.