Proch-N50 v1.5.7-TRIAL Perl 5 v5.30.3 x86_64-linux-quadmath
- Status
- Pass
- From
- David Cantrell (DCANTRELL)
- Dist
-
Proch-N50 v1.5.7-TRIAL
- Platform
- Perl 5 v5.30.3 x86_64-linux-quadmath
- Date
- 2023-02-04 06:25:28
- ID
- b77d8e7c-a454-11ed-b882-e867cab3a677
This distribution has been tested as part of the CPAN Testers
project, supporting the Perl programming language. See
http://wiki.cpantesters.org/ for more information or email
questions to cpan-testers-discuss@perl.org
--
Dear Andrea Telatin,
This is a computer-generated report for Proch-N50-1.5.7-TRIAL
on perl 5.30.3, created by CPAN-Reporter-1.2018.
Thank you for uploading your work to CPAN. Congratulations!
All tests were successful.
Sections of this report:
* Tester comments
* Program output
* Prerequisites
* Environment and other context
------------------------------
TESTER COMMENTS
------------------------------
Additional comments from tester:
this report is from an automated smoke testing program
and was not reviewed by a human for accuracy
------------------------------
PROGRAM OUTPUT
------------------------------
Output from '/usr/bin/make test':
PERL_DL_NONLAZY=1 "/home/david/cpantesting/perl-5.30.3-quadmath/bin/perl" "-MExtUtils::Command::MM" "-MTest::Harness" "-e" "undef *Test::Harness::Switches; test_harness(0, 'blib/lib', 'blib/arch')" t/*.t
t/10-Requires_FASTX-reader-seq.t ... ok
t/10_Load_Modules.t ................ ok
t/10_Requires_FASTX-reader.t ....... ok
t/11_calculateN50.t ................ ok
t/11_seqfu.t ....................... ok
t/11_seqfu_ext.t ................... ok
t/12_new_stats.t ................... ok
t/12_stats.t ....................... ok
t/13_json.t ........................ ok
t/14_bad_file.t .................... ok
t/15_bad_json.t .................... ok
t/20_External_Call.t ............... skipped: these tests are for release candidate testing
t/30_Windows.t ..................... ok
# N50 cmd: </home/david/cpantesting/perl-5.30.3-quadmath/bin/perl "/home/david/cpantesting/perl-5.30.3-quadmath/.cpan/build/Proch-N50-1.5.7-0/t/../bin/n50" "/home/david/cpantesting/perl-5.30.3-quadmath/.cpan/build/Proch-N50-1.5.7-0/t/../data/small_test.fa">
# N50 output: <65>
t/49-prebins.t ..................... ok
STDOUT=[1;34mFASTX N50, ver. 4.2.0[0m
[34mPr...[0m
STDERR=OK[0m
TEST=(0)[0m
t/50-n50bin.t ...................... ok
t/author-50-helps.t ................ skipped: these tests are for release candidate testing
t/author-50-n50bin.t ............... skipped: these tests are for release candidate testing
t/author-50-version.t .............. skipped: these tests are for release candidate testing
t/author-51-other-bins.t ........... skipped: these tests are for release candidate testing
t/author-52-cat.t .................. skipped: these tests are for release candidate testing
t/author-52-grep.t ................. skipped: these tests are for release candidate testing
t/author-53-count.t ................ skipped: these tests are for release candidate testing
t/author-54-extract.t .............. skipped: these tests are for release candidate testing
t/author-55-uniq.t ................. skipped: these tests are for release candidate testing
t/author-99_posse.t ................ skipped: these tests are for release candidate testing
t/release-00-pod.t ................. skipped: these tests are for release candidate testing
t/release-01-pod-coverage.t ........ skipped: these tests are for release candidate testing
t/release-03-minimum-standards.t ... skipped: these tests are for release candidate testing
t/release-04-check-cpan-version.t .. skipped: these tests are for release candidate testing
t/release-05-changes-ver.t ......... skipped: these tests are for release candidate testing
t/release-05-changes.t ............. skipped: these tests are for release candidate testing
t/release-06-fastx-reader.t ........ skipped: these tests are for release candidate testing
t/release-19_exec.t ................ skipped: these tests are for release candidate testing
t/release-20_custom.t .............. skipped: these tests are for release candidate testing
t/release-20_stdin.t ............... skipped: these tests are for release candidate testing
t/release-21_bin.t ................. skipped: these tests are for release candidate testing
t/release-22_csv.t ................. skipped: these tests are for release candidate testing
All tests successful.
Files=37, Tests=43, 9 wallclock secs ( 0.15 usr 0.05 sys + 2.12 cusr 0.36 csys = 2.68 CPU)
Result: PASS
------------------------------
PREREQUISITES
------------------------------
Prerequisite modules loaded:
requires:
Module Need Have
------------------- ------ --------
FASTX::Reader v1.8.0 1.10.0
Getopt::Long 2.39 2.5
JSON::PP 2.27 4.02
perl 5.012 5.030003
PerlIO::encoding 0 0.27
Pod::Usage 1.61 1.69
Text::ASCIITable 0 0.22
build_requires:
Module Need Have
------------------- ------ --------
ExtUtils::MakeMaker 0 7.66
configure_requires:
Module Need Have
------------------- ------ --------
ExtUtils::MakeMaker 0 7.66
------------------------------
ENVIRONMENT AND OTHER CONTEXT
------------------------------
Environment variables:
AUTOMATED_TESTING = 1
LANG = en_GB.UTF-8
LANGUAGE = en_GB:en
LC_TERMINAL = iTerm2
LC_TERMINAL_VERSION = 3.4.19
NONINTERACTIVE_TESTING = 1
PATH = /home/david/.nvm/versions/node/v18.13.0/bin:/home/david/.cargo/bin:/home/david/perl5/perlbrew/bin:/home/david/perl5/perlbrew/perls/perl-5.30.2/bin:/home/david/bin:/usr/local/bin:/usr/bin:/bin:/usr/local/games:/usr/games
PERL = 5.30.3-quadmath
PERL5LIB =
PERL5OPT =
PERL5_CPANPLUS_IS_RUNNING = 122433
PERL5_CPAN_IS_RUNNING = 122433
PERLBREW_HOME = /home/david/.perlbrew
PERLBREW_MANPATH = /home/david/perl5/perlbrew/perls/perl-5.30.2/man
PERLBREW_PATH = /home/david/perl5/perlbrew/bin:/home/david/perl5/perlbrew/perls/perl-5.30.2/bin
PERLBREW_PERL = perl-5.30.2
PERLBREW_ROOT = /home/david/perl5/perlbrew
PERLBREW_SHELLRC_VERSION = 0.89
PERLBREW_VERSION = 0.89
PERLVER = 5.30.3-quadmath
PERL_INLINE_DIRECTORY = /home/david/.Inline-5.30.3-quadmath
PERL_MM_USE_DEFAULT = 1
PERL_USE_UNSAFE_INC = 0
SHELL = /bin/bash
TERM = screen
Perl special variables (and OS-specific diagnostics, for MSWin32):
$^X = /home/david/cpantesting/perl-5.30.3-quadmath/bin/perl
$UID/$EUID = 1000 / 1000
$GID = 1000 24 25 27 29 30 44 46 109 1000
$EGID = 1000 24 25 27 29 30 44 46 109 1000
Perl module toolchain versions installed:
Module Have
------------------- --------
CPAN 2.22
CPAN::Meta 2.150010
Cwd 3.78
ExtUtils::CBuilder 0.280236
ExtUtils::Command 7.66
ExtUtils::Install 2.14
ExtUtils::MakeMaker 7.66
ExtUtils::Manifest 1.72
ExtUtils::ParseXS 3.40
File::Spec 3.78
JSON 4.10
JSON::PP 4.02
Module::Build 0.4231
Module::Signature n/a
Parse::CPAN::Meta 2.150010
Test::Harness 3.42
Test::More 1.302192
YAML n/a
YAML::Syck n/a
version 0.9924
--
Summary of my perl5 (revision 5 version 30 subversion 3) configuration:
Platform:
osname=linux
osvers=5.10.0-11-amd64
archname=x86_64-linux-quadmath
uname='linux cpantesting-linux-utm 5.10.0-11-amd64 #1 smp debian 5.10.92-1 (2022-01-18) x86_64 gnulinux '
config_args='-de -Dusequadmath -Dprefix=/home/david/cpantesting/perl-5.30.3-quadmath'
hint=recommended
useposix=true
d_sigaction=define
useithreads=undef
usemultiplicity=undef
use64bitint=define
use64bitall=define
uselongdouble=undef
usemymalloc=n
default_inc_excludes_dot=define
bincompat5005=undef
Compiler:
cc='cc'
ccflags ='-fwrapv -fno-strict-aliasing -pipe -fstack-protector-strong -I/usr/local/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2'
optimize='-O2'
cppflags='-fwrapv -fno-strict-aliasing -pipe -fstack-protector-strong -I/usr/local/include'
ccversion=''
gccversion='10.2.1 20210110'
gccosandvers=''
intsize=4
longsize=8
ptrsize=8
doublesize=8
byteorder=12345678
doublekind=3
d_longlong=define
longlongsize=8
d_longdbl=define
longdblsize=16
longdblkind=3
ivtype='long'
ivsize=8
nvtype='__float128'
nvsize=16
Off_t='off_t'
lseeksize=8
alignbytes=16
prototype=define
Linker and Libraries:
ld='cc'
ldflags =' -fstack-protector-strong -L/usr/local/lib'
libpth=/usr/local/lib /usr/include/x86_64-linux-gnu /usr/lib /lib/x86_64-linux-gnu /lib/../lib /usr/lib/x86_64-linux-gnu /usr/lib/../lib /lib /lib64 /usr/lib64
libs=-lpthread -lnsl -ldl -lm -lcrypt -lutil -lc -lquadmath
perllibs=-lpthread -lnsl -ldl -lm -lcrypt -lutil -lc -lquadmath
libc=libc-2.31.so
so=so
useshrplib=false
libperl=libperl.a
gnulibc_version='2.31'
Dynamic Linking:
dlsrc=dl_dlopen.xs
dlext=so
d_dlsymun=undef
ccdlflags='-Wl,-E'
cccdlflags='-fPIC'
lddlflags='-shared -O2 -L/usr/local/lib -fstack-protector-strong'
Characteristics of this binary (from libperl):
Compile-time options:
HAS_TIMES
PERLIO_LAYERS
PERL_COPY_ON_WRITE
PERL_DONT_CREATE_GVSV
PERL_MALLOC_WRAP
PERL_OP_PARENT
PERL_PRESERVE_IVUV
USE_64_BIT_ALL
USE_64_BIT_INT
USE_LARGE_FILES
USE_LOCALE
USE_LOCALE_COLLATE
USE_LOCALE_CTYPE
USE_LOCALE_NUMERIC
USE_LOCALE_TIME
USE_PERLIO
USE_PERL_ATOF
USE_QUADMATH
Locally applied patches:
Devel::PatchPerl 2.08
Built under linux
Compiled at Feb 5 2022 23:00:34
%ENV:
PERL="5.30.3-quadmath"
PERL5LIB=""
PERL5OPT=""
PERL5_CPANPLUS_IS_RUNNING="122433"
PERL5_CPAN_IS_RUNNING="122433"
PERLBREW_HOME="/home/david/.perlbrew"
PERLBREW_MANPATH="/home/david/perl5/perlbrew/perls/perl-5.30.2/man"
PERLBREW_PATH="/home/david/perl5/perlbrew/bin:/home/david/perl5/perlbrew/perls/perl-5.30.2/bin"
PERLBREW_PERL="perl-5.30.2"
PERLBREW_ROOT="/home/david/perl5/perlbrew"
PERLBREW_SHELLRC_VERSION="0.89"
PERLBREW_VERSION="0.89"
PERLVER="5.30.3-quadmath"
PERL_INLINE_DIRECTORY="/home/david/.Inline-5.30.3-quadmath"
PERL_MM_USE_DEFAULT="1"
PERL_USE_UNSAFE_INC="0"
@INC:
/home/david/cpantesting/perl-5.30.3-quadmath/lib/site_perl/5.30.3/x86_64-linux-quadmath
/home/david/cpantesting/perl-5.30.3-quadmath/lib/site_perl/5.30.3
/home/david/cpantesting/perl-5.30.3-quadmath/lib/5.30.3/x86_64-linux-quadmath
/home/david/cpantesting/perl-5.30.3-quadmath/lib/5.30.3