Proch-N50 v1.5.7-TRIAL Perl 5 v5.37.7 x86_64-linux-multi-ld
- Status
- Pass
- From
- Andreas J. König (ANDK)
- Dist
-
Proch-N50 v1.5.7-TRIAL
- Platform
- Perl 5 v5.37.7 x86_64-linux-multi-ld
- Date
- 2023-02-07 08:44:09
- ID
- 96e87a5c-a6c3-11ed-bcf1-e112eb881259
This distribution has been tested as part of the CPAN Testers
project, supporting the Perl programming language. See
http://wiki.cpantesters.org/ for more information or email
questions to cpan-testers-discuss@perl.org
--
Dear Andrea Telatin,
This is a computer-generated report for Proch-N50-1.5.7-TRIAL
on perl 5.37.7, created by CPAN-Reporter-1.2018.
Thank you for uploading your work to CPAN. Congratulations!
All tests were successful.
Sections of this report:
* Tester comments
* Program output
* Prerequisites
* Environment and other context
------------------------------
TESTER COMMENTS
------------------------------
Additional comments from tester:
this report is from an automated smoke testing program
and was not reviewed by a human for accuracy
------------------------------
PROGRAM OUTPUT
------------------------------
Output from '/usr/bin/make test':
PERL_DL_NONLAZY=1 "/home/sand/src/perl/repoperls/installed-perls/host/k93msid/v5.37.7/1d53/bin/perl" "-MExtUtils::Command::MM" "-MTest::Harness" "-e" "undef *Test::Harness::Switches; test_harness(0, 'blib/lib', 'blib/arch')" t/*.t
t/10-Requires_FASTX-reader-seq.t ... ok
t/10_Load_Modules.t ................ ok
t/10_Requires_FASTX-reader.t ....... ok
t/11_calculateN50.t ................ ok
t/11_seqfu.t ....................... ok
t/11_seqfu_ext.t ................... ok
t/12_new_stats.t ................... ok
t/12_stats.t ....................... ok
t/13_json.t ........................ ok
t/14_bad_file.t .................... ok
t/15_bad_json.t .................... ok
t/20_External_Call.t ............... skipped: these tests are for release candidate testing
t/30_Windows.t ..................... ok
# N50 cmd: </home/sand/src/perl/repoperls/installed-perls/host/k93msid/v5.37.7/1d53/bin/perl "/tmp/loop_over_bdir-2030516-rmX_KE/Proch-N50-1.5.7-0/t/../bin/n50" "/tmp/loop_over_bdir-2030516-rmX_KE/Proch-N50-1.5.7-0/t/../data/small_test.fa">
# N50 output: <65>
t/49-prebins.t ..................... ok
STDOUT=[1;34mFASTX N50, ver. 4.2.0[0m
[34mPr...[0m
STDERR=OK[0m
TEST=(0)[0m
t/50-n50bin.t ...................... ok
t/author-50-helps.t ................ skipped: these tests are for release candidate testing
t/author-50-n50bin.t ............... skipped: these tests are for release candidate testing
t/author-50-version.t .............. skipped: these tests are for release candidate testing
t/author-51-other-bins.t ........... skipped: these tests are for release candidate testing
t/author-52-cat.t .................. skipped: these tests are for release candidate testing
t/author-52-grep.t ................. skipped: these tests are for release candidate testing
t/author-53-count.t ................ skipped: these tests are for release candidate testing
t/author-54-extract.t .............. skipped: these tests are for release candidate testing
t/author-55-uniq.t ................. skipped: these tests are for release candidate testing
t/author-99_posse.t ................ skipped: these tests are for release candidate testing
t/release-00-pod.t ................. skipped: these tests are for release candidate testing
t/release-01-pod-coverage.t ........ skipped: these tests are for release candidate testing
t/release-03-minimum-standards.t ... skipped: these tests are for release candidate testing
t/release-04-check-cpan-version.t .. skipped: these tests are for release candidate testing
t/release-05-changes-ver.t ......... skipped: these tests are for release candidate testing
t/release-05-changes.t ............. skipped: these tests are for release candidate testing
t/release-06-fastx-reader.t ........ skipped: these tests are for release candidate testing
t/release-19_exec.t ................ skipped: these tests are for release candidate testing
t/release-20_custom.t .............. skipped: these tests are for release candidate testing
t/release-20_stdin.t ............... skipped: these tests are for release candidate testing
t/release-21_bin.t ................. skipped: these tests are for release candidate testing
t/release-22_csv.t ................. skipped: these tests are for release candidate testing
All tests successful.
Files=37, Tests=43, 2 wallclock secs ( 0.08 usr 0.04 sys + 1.57 cusr 0.29 csys = 1.98 CPU)
Result: PASS
------------------------------
PREREQUISITES
------------------------------
Prerequisite modules loaded:
requires:
Module Need Have
------------------- ------ --------
FASTX::Reader v1.8.0 1.10.0
Getopt::Long 2.39 2.54
JSON::PP 2.27 4.12
perl 5.012 5.037007
PerlIO::encoding 0 0.30
Pod::Usage 1.61 2.03
Text::ASCIITable 0 0.22
build_requires:
Module Need Have
------------------- ------ --------
ExtUtils::MakeMaker 0 7.64
configure_requires:
Module Need Have
------------------- ------ --------
ExtUtils::MakeMaker 0 7.64
------------------------------
ENVIRONMENT AND OTHER CONTEXT
------------------------------
Environment variables:
AUTOMATED_TESTING = 1
LANG = en_US.UTF-8
LANGUAGE = en_US:en
PATH = /home/sand/bin:/usr/local/bin:/usr/bin:/bin:/usr/games:/usr/local/perl/bin:/usr/X11/bin:/sbin:/usr/sbin
PERL5LIB =
PERL5OPT =
PERL5_CPANPLUS_IS_RUNNING = 2359474
PERL5_CPAN_IS_RUNNING = 2359474
PERL_CANARY_STABILITY_NOPROMPT = 1
PERL_MM_USE_DEFAULT = 1
PERL_USE_UNSAFE_INC = 1
SHELL = /usr/bin/zsh
TERM = screen
Perl special variables (and OS-specific diagnostics, for MSWin32):
$^X = /home/sand/src/perl/repoperls/installed-perls/host/k93msid/v5.37.7/1d53/bin/perl
$UID/$EUID = 1005 / 1005
$GID = 1005 1005
$EGID = 1005 1005
Perl module toolchain versions installed:
Module Have
------------------- --------
CPAN 2.34
CPAN::Meta 2.150010
Cwd 3.88
ExtUtils::CBuilder 0.280238
ExtUtils::Command 7.64
ExtUtils::Install 2.20
ExtUtils::MakeMaker 7.64
ExtUtils::Manifest 1.73
ExtUtils::ParseXS 3.49
File::Spec 3.88
JSON 4.10
JSON::PP 4.12
Module::Build 0.4232
Module::Signature 0.88
Parse::CPAN::Meta 2.150010
Test::Harness 3.44
Test::More 1.302191
YAML 1.30
YAML::Syck 1.34
version 0.9929
--
Summary of my perl5 (revision 5 version 37 subversion 7) configuration:
Commit id: b1163c2ae562670f2bf4c7700087f0c9d0ad8fe5
Platform:
osname=linux
osvers=6.0.0-5-amd64
archname=x86_64-linux-multi-ld
uname='linux k93msid 6.0.0-5-amd64 #1 smp preempt_dynamic debian 6.0.10-2 (2022-12-01) x86_64 gnulinux '
config_args='-Dprefix=/home/sand/src/perl/repoperls/installed-perls/host/k93msid/v5.37.7/1d53 -Dmyhostname=k93msid -Dinstallusrbinperl=n -Uversiononly -Dusedevel -des -Ui_db -Dlibswanted=cl pthread socket inet nsl gdbm dbm malloc dl ld sun m crypt sec util c cposix posix ucb BSD gdbm_compat -Uuseithreads -Duselongdouble -DEBUGGING=both -Dusemultiplicity'
hint=recommended
useposix=true
d_sigaction=define
useithreads=undef
usemultiplicity=define
use64bitint=define
use64bitall=define
uselongdouble=define
usemymalloc=n
default_inc_excludes_dot=define
Compiler:
cc='cc'
ccflags ='-fwrapv -DDEBUGGING -fno-strict-aliasing -pipe -fstack-protector-strong -I/usr/local/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2'
optimize='-O2 -g'
cppflags='-fwrapv -DDEBUGGING -fno-strict-aliasing -pipe -fstack-protector-strong -I/usr/local/include'
ccversion=''
gccversion='12.2.0'
gccosandvers=''
intsize=4
longsize=8
ptrsize=8
doublesize=8
byteorder=12345678
doublekind=3
d_longlong=define
longlongsize=8
d_longdbl=define
longdblsize=16
longdblkind=3
ivtype='long'
ivsize=8
nvtype='long double'
nvsize=16
Off_t='off_t'
lseeksize=8
alignbytes=16
prototype=define
Linker and Libraries:
ld='cc'
ldflags =' -fstack-protector-strong -L/usr/local/lib'
libpth=/usr/local/lib /usr/lib/x86_64-linux-gnu /usr/lib /usr/lib64
libs=-lpthread -lnsl -ldl -lm -lcrypt -lutil -lc
perllibs=-lpthread -lnsl -ldl -lm -lcrypt -lutil -lc
libc=/lib/x86_64-linux-gnu/libc.so.6
so=so
useshrplib=false
libperl=libperl.a
gnulibc_version='2.36'
Dynamic Linking:
dlsrc=dl_dlopen.xs
dlext=so
d_dlsymun=undef
ccdlflags='-Wl,-E'
cccdlflags='-fPIC'
lddlflags='-shared -O2 -g -L/usr/local/lib -fstack-protector-strong'
Characteristics of this binary (from libperl):
Compile-time options:
DEBUGGING
HAS_TIMES
MULTIPLICITY
PERLIO_LAYERS
PERL_COPY_ON_WRITE
PERL_DONT_CREATE_GVSV
PERL_HASH_FUNC_SIPHASH13
PERL_HASH_USE_SBOX32
PERL_MALLOC_WRAP
PERL_OP_PARENT
PERL_PRESERVE_IVUV
PERL_TRACK_MEMPOOL
PERL_USE_DEVEL
PERL_USE_SAFE_PUTENV
USE_64_BIT_ALL
USE_64_BIT_INT
USE_LARGE_FILES
USE_LOCALE
USE_LOCALE_COLLATE
USE_LOCALE_CTYPE
USE_LOCALE_NUMERIC
USE_LOCALE_TIME
USE_LONG_DOUBLE
USE_PERLIO
USE_PERL_ATOF
Built under linux
Compiled at Dec 20 2022 23:15:53
%ENV:
PERL5LIB=""
PERL5OPT=""
PERL5_CPANPLUS_IS_RUNNING="2359474"
PERL5_CPAN_IS_RUNNING="2359474"
PERL_CANARY_STABILITY_NOPROMPT="1"
PERL_MM_USE_DEFAULT="1"
PERL_USE_UNSAFE_INC="1"
@INC:
/home/sand/src/perl/repoperls/installed-perls/host/k93msid/v5.37.7/1d53/lib/site_perl/5.37.7/x86_64-linux-multi-ld
/home/sand/src/perl/repoperls/installed-perls/host/k93msid/v5.37.7/1d53/lib/site_perl/5.37.7
/home/sand/src/perl/repoperls/installed-perls/host/k93msid/v5.37.7/1d53/lib/5.37.7/x86_64-linux-multi-ld
/home/sand/src/perl/repoperls/installed-perls/host/k93msid/v5.37.7/1d53/lib/5.37.7
.