Back
From: metabase:user:0d96120c-29e2-11e5-b049-ede3035d37de
Subject: FAIL Chemistry-InternalCoords-0.18 v5.20.2 GNU/Linux
Date: 2015-07-17T07:14:36Z
This distribution has been tested as part of the CPAN Testers
project, supporting the Perl programming language. See
http://wiki.cpantesters.org/ for more information or email
questions to cpan-testers-discuss@perl.org
--
Dear Ivan Tubert-Brohman,
This is a computer-generated report for Chemistry-InternalCoords-0.18
on perl 5.20.2, created by CPAN-Reporter-1.2014.
Thank you for uploading your work to CPAN. However, there was a problem
testing your distribution.
If you think this report is invalid, please consult the CPAN Testers Wiki
for suggestions on how to avoid getting FAIL reports for missing library
or binary dependencies, unsupported operating systems, and so on:
http://wiki.cpantesters.org/wiki/CPANAuthorNotes
Sections of this report:
* Tester comments
* Program output
* Prerequisites
* Environment and other context
------------------------------
TESTER COMMENTS
------------------------------
Additional comments from tester:
this report is from an automated smoke testing program
and was not reviewed by a human for accuracy
------------------------------
PROGRAM OUTPUT
------------------------------
Output from '/usr/bin/make test':
PERL_DL_NONLAZY=1 "/data/perl5/perlbrew/perls/perl-5.20.2/bin/perl" "-MExtUtils::Command::MM" "-MTest::Harness" "-e" "undef *Test::Harness::Switches; test_harness(0, 'blib/lib', 'blib/arch')" t/*.t
Variable "%reduce" is not imported at /data/.cpan/build/Chemistry-InternalCoords-0.18-vUJca_/blib/lib/Chemistry/InternalCoords/Builder.pm line 171.
(Did you mean &reduce instead?)
"my" variable $atom masks earlier declaration in same scope at /data/.cpan/build/Chemistry-InternalCoords-0.18-vUJca_/blib/lib/Chemistry/InternalCoords/Builder.pm line 193.
"my" variable $atoms masks earlier declaration in same scope at /data/.cpan/build/Chemistry-InternalCoords-0.18-vUJca_/blib/lib/Chemistry/InternalCoords/Builder.pm line 193.
"state" variable @_ masks earlier declaration in same scope at /data/.cpan/build/Chemistry-InternalCoords-0.18-vUJca_/blib/lib/Chemistry/InternalCoords/Builder.pm line 193.
"my" variable $len_ref masks earlier declaration in same scope at /data/.cpan/build/Chemistry-InternalCoords-0.18-vUJca_/blib/lib/Chemistry/InternalCoords/Builder.pm line 194.
"my" variable $len_val masks earlier declaration in same scope at /data/.cpan/build/Chemistry-InternalCoords-0.18-vUJca_/blib/lib/Chemistry/InternalCoords/Builder.pm line 194.
"my" variable $ang_ref masks earlier declaration in same scope at /data/.cpan/build/Chemistry-InternalCoords-0.18-vUJca_/blib/lib/Chemistry/InternalCoords/Builder.pm line 194.
"my" variable $ang_val masks earlier declaration in same scope at /data/.cpan/build/Chemistry-InternalCoords-0.18-vUJca_/blib/lib/Chemistry/InternalCoords/Builder.pm line 194.
Global symbol "%reduce" requires explicit package name at /data/.cpan/build/Chemistry-InternalCoords-0.18-vUJca_/blib/lib/Chemistry/InternalCoords/Builder.pm line 171.
syntax error at /data/.cpan/build/Chemistry-InternalCoords-0.18-vUJca_/blib/lib/Chemistry/InternalCoords/Builder.pm line 172, near "map"
Global symbol "$ref" requires explicit package name at /data/.cpan/build/Chemistry-InternalCoords-0.18-vUJca_/blib/lib/Chemistry/InternalCoords/Builder.pm line 176.
Global symbol "$atom" requires explicit package name at /data/.cpan/build/Chemistry-InternalCoords-0.18-vUJca_/blib/lib/Chemistry/InternalCoords/Builder.pm line 176.
Global symbol "$ref" requires explicit package name at /data/.cpan/build/Chemistry-InternalCoords-0.18-vUJca_/blib/lib/Chemistry/InternalCoords/Builder.pm line 176.
syntax error at /data/.cpan/build/Chemistry-InternalCoords-0.18-vUJca_/blib/lib/Chemistry/InternalCoords/Builder.pm line 177, near "}"
Can't use global @_ in "my" at /data/.cpan/build/Chemistry-InternalCoords-0.18-vUJca_/blib/lib/Chemistry/InternalCoords/Builder.pm line 181, near "= @_"
syntax error at /data/.cpan/build/Chemistry-InternalCoords-0.18-vUJca_/blib/lib/Chemistry/InternalCoords/Builder.pm line 189, near "}"
Can't use global @_ in "my" at /data/.cpan/build/Chemistry-InternalCoords-0.18-vUJca_/blib/lib/Chemistry/InternalCoords/Builder.pm line 193, near "= @_"
syntax error at /data/.cpan/build/Chemistry-InternalCoords-0.18-vUJca_/blib/lib/Chemistry/InternalCoords/Builder.pm line 202, near "}"
/data/.cpan/build/Chemistry-InternalCoords-0.18-vUJca_/blib/lib/Chemistry/InternalCoords/Builder.pm has too many errors.
Compilation failed in require at t/builder.t line 16.
BEGIN failed--compilation aborted at t/builder.t line 16.
t/builder.t ..
Dubious, test returned 255 (wstat 65280, 0xff00)
No subtests run
t/ic.t ....... ok
t/pod.t ...... ok
Test Summary Report
-------------------
t/builder.t (Wstat: 65280 Tests: 0 Failed: 0)
Non-zero exit status: 255
Parse errors: No plan found in TAP output
Files=3, Tests=132, 0 wallclock secs ( 0.02 usr 0.00 sys + 0.10 cusr 0.02 csys = 0.14 CPU)
Result: FAIL
Failed 1/3 test programs. 0/132 subtests failed.
Makefile:841: recipe for target 'test_dynamic' failed
make: *** [test_dynamic] Error 255
------------------------------
PREREQUISITES
------------------------------
Prerequisite modules loaded:
requires:
Module Need Have
----------------------- ---- ----
Chemistry::Bond::Find 0.2 0.23
Chemistry::Canonicalize 0.1 0.11
Chemistry::Mol 0.25 0.37
Scalar::Util 0 1.42
build_requires:
Module Need Have
----------------------- ---- ----
ExtUtils::MakeMaker 0 7.04
------------------------------
ENVIRONMENT AND OTHER CONTEXT
------------------------------
Environment variables:
AUTOMATED_TESTING = 1
LANG = en_US.UTF-8
NONINTERACTIVE_TESTING = 1
PATH = /home/perltest/perl5/perlbrew/bin:/home/perltest/perl5/perlbrew/perls/perl-5.20.2/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/usr/local/games
PERL5LIB = /home/perltest/.cpan/build/Chemistry-File-SMILES-0.47-If_i5P/blib/arch:/home/perltest/.cpan/build/Chemistry-File-SMILES-0.47-If_i5P/blib/lib:/home/perltest/.cpan/build/Chemistry-Ring-0.20-aNJ22T/blib/arch:/home/perltest/.cpan/build/Chemistry-Ring-0.20-aNJ22T/blib/lib:/home/perltest/.cpan/build/Statistics-Regression-0.53-1vzNgk/blib/arch:/home/perltest/.cpan/build/Statistics-Regression-0.53-1vzNgk/blib/lib:/home/perltest/.cpan/build/Chemistry-Canonicalize-0.11-gwrFUP/blib/arch:/home/perltest/.cpan/build/Chemistry-Canonicalize-0.11-gwrFUP/blib/lib:/home/perltest/.cpan/build/Chemistry-Bond-Find-0.23-lsdhRT/blib/arch:/home/perltest/.cpan/build/Chemistry-Bond-Find-0.23-lsdhRT/blib/lib:/home/perltest/.cpan/build/Chemistry-Pattern-0.27-dXfYzP/blib/arch:/home/perltest/.cpan/build/Chemistry-Pattern-0.27-dXfYzP/blib/lib:/home/perltest/.cpan/build/Chemistry-Mol-0.37-Rn9G54/blib/arch:/home/perltest/.cpan/build/Chemistry-Mol-0.37-Rn9G54/blib/lib:/home/perltest/.cpan/build/Math-VectorReal-1.02-mirp0j/blib/arch:/home/perltest/.cpan/build/Math-VectorReal-1.02-mirp0j/blib/lib
PERL5OPT =
PERL5_CPANPLUS_IS_RUNNING = 20396
PERL5_CPAN_IS_RUNNING = 20396
PERL5_CPAN_IS_RUNNING_IN_RECURSION = 26454,20396
PERLBREW_BASHRC_VERSION = 0.73
PERLBREW_HOME = /home/perltest/.perlbrew
PERLBREW_MANPATH = /home/perltest/perl5/perlbrew/perls/perl-5.20.2/man
PERLBREW_PATH = /home/perltest/perl5/perlbrew/bin:/home/perltest/perl5/perlbrew/perls/perl-5.20.2/bin
PERLBREW_PERL = perl-5.20.2
PERLBREW_ROOT = /home/perltest/perl5/perlbrew
PERLBREW_VERSION = 0.73
PERL_CR_SMOKER_CURRENT = Chemistry-3DBuilder-0.10
PERL_EXTUTILS_AUTOINSTALL = --defaultdeps
PERL_MM_USE_DEFAULT = 1
SHELL = /bin/bash
TERM = screen
Perl special variables (and OS-specific diagnostics, for MSWin32):
$^X = /data/perl5/perlbrew/perls/perl-5.20.2/bin/perl
$UID/$EUID = 2000 / 2000
$GID = 2000 2000
$EGID = 2000 2000
Perl module toolchain versions installed:
Module Have
------------------- --------
CPAN 2.05
CPAN::Meta 2.150005
Cwd 3.48_01
ExtUtils::CBuilder 0.280217
ExtUtils::Command 1.18
ExtUtils::Install 1.67
ExtUtils::MakeMaker 7.04
ExtUtils::Manifest 1.70
ExtUtils::ParseXS 3.24
File::Spec 3.48_01
JSON 2.90
JSON::PP 2.27203
Module::Build 0.4214
Module::Signature 0.79
Parse::CPAN::Meta 1.4417
Test::Harness 3.30
Test::More 1.001014
YAML 1.15
YAML::Syck 1.29
version 0.9909
--
Summary of my perl5 (revision 5 version 20 subversion 2) configuration:
Platform:
osname=linux, osvers=3.19.0-18-generic, archname=x86_64-linux
uname='linux perltest 3.19.0-18-generic #18-ubuntu smp tue may 19 18:31:35 utc 2015 x86_64 x86_64 x86_64 gnulinux '
config_args='-de -Dprefix=/home/perltest/perl5/perlbrew/perls/perl-5.20.2 -Aeval:scriptdir=/home/perltest/perl5/perlbrew/perls/perl-5.20.2/bin'
hint=recommended, useposix=true, d_sigaction=define
useithreads=undef, usemultiplicity=undef
use64bitint=define, use64bitall=define, uselongdouble=undef
usemymalloc=n, bincompat5005=undef
Compiler:
cc='cc', ccflags ='-fwrapv -fno-strict-aliasing -pipe -fstack-protector -I/usr/local/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64',
optimize='-O2',
cppflags='-fwrapv -fno-strict-aliasing -pipe -fstack-protector -I/usr/local/include'
ccversion='', gccversion='4.9.2', gccosandvers=''
intsize=4, longsize=8, ptrsize=8, doublesize=8, byteorder=12345678
d_longlong=define, longlongsize=8, d_longdbl=define, longdblsize=16
ivtype='long', ivsize=8, nvtype='double', nvsize=8, Off_t='off_t', lseeksize=8
alignbytes=8, prototype=define
Linker and Libraries:
ld='cc', ldflags =' -fstack-protector -L/usr/local/lib'
libpth=/usr/local/lib /usr/lib/gcc/x86_64-linux-gnu/4.9/include-fixed /usr/include/x86_64-linux-gnu /usr/lib /lib/x86_64-linux-gnu /lib/../lib /usr/lib/x86_64-linux-gnu /usr/lib/../lib /lib
libs=-lnsl -ldl -lm -lcrypt -lutil -lc
perllibs=-lnsl -ldl -lm -lcrypt -lutil -lc
libc=libc-2.21.so, so=so, useshrplib=false, libperl=libperl.a
gnulibc_version='2.21'
Dynamic Linking:
dlsrc=dl_dlopen.xs, dlext=so, d_dlsymun=undef, ccdlflags='-Wl,-E'
cccdlflags='-fPIC', lddlflags='-shared -O2 -L/usr/local/lib -fstack-protector'
Characteristics of this binary (from libperl):
Compile-time options: HAS_TIMES PERLIO_LAYERS PERL_DONT_CREATE_GVSV
PERL_HASH_FUNC_ONE_AT_A_TIME_HARD PERL_MALLOC_WRAP
PERL_NEW_COPY_ON_WRITE PERL_PRESERVE_IVUV
USE_64_BIT_ALL USE_64_BIT_INT USE_LARGE_FILES
USE_LOCALE USE_LOCALE_COLLATE USE_LOCALE_CTYPE
USE_LOCALE_NUMERIC USE_PERLIO USE_PERL_ATOF
Locally applied patches:
Devel::PatchPerl 1.38
Built under linux
Compiled at Jul 14 2015 18:27:24
%ENV:
PERL5LIB="/home/perltest/.cpan/build/Chemistry-File-SMILES-0.47-If_i5P/blib/arch:/home/perltest/.cpan/build/Chemistry-File-SMILES-0.47-If_i5P/blib/lib:/home/perltest/.cpan/build/Chemistry-Ring-0.20-aNJ22T/blib/arch:/home/perltest/.cpan/build/Chemistry-Ring-0.20-aNJ22T/blib/lib:/home/perltest/.cpan/build/Statistics-Regression-0.53-1vzNgk/blib/arch:/home/perltest/.cpan/build/Statistics-Regression-0.53-1vzNgk/blib/lib:/home/perltest/.cpan/build/Chemistry-Canonicalize-0.11-gwrFUP/blib/arch:/home/perltest/.cpan/build/Chemistry-Canonicalize-0.11-gwrFUP/blib/lib:/home/perltest/.cpan/build/Chemistry-Bond-Find-0.23-lsdhRT/blib/arch:/home/perltest/.cpan/build/Chemistry-Bond-Find-0.23-lsdhRT/blib/lib:/home/perltest/.cpan/build/Chemistry-Pattern-0.27-dXfYzP/blib/arch:/home/perltest/.cpan/build/Chemistry-Pattern-0.27-dXfYzP/blib/lib:/home/perltest/.cpan/build/Chemistry-Mol-0.37-Rn9G54/blib/arch:/home/perltest/.cpan/build/Chemistry-Mol-0.37-Rn9G54/blib/lib:/home/perltest/.cpan/build/Math-VectorReal-1.02-mirp0j/blib/arch:/home/perltest/.cpan/build/Math-VectorReal-1.02-mirp0j/blib/lib"
PERL5OPT=""
PERL5_CPANPLUS_IS_RUNNING="20396"
PERL5_CPAN_IS_RUNNING="20396"
PERL5_CPAN_IS_RUNNING_IN_RECURSION="26454,20396"
PERLBREW_BASHRC_VERSION="0.73"
PERLBREW_HOME="/home/perltest/.perlbrew"
PERLBREW_MANPATH="/home/perltest/perl5/perlbrew/perls/perl-5.20.2/man"
PERLBREW_PATH="/home/perltest/perl5/perlbrew/bin:/home/perltest/perl5/perlbrew/perls/perl-5.20.2/bin"
PERLBREW_PERL="perl-5.20.2"
PERLBREW_ROOT="/home/perltest/perl5/perlbrew"
PERLBREW_VERSION="0.73"
PERL_CR_SMOKER_CURRENT="Chemistry-3DBuilder-0.10"
PERL_EXTUTILS_AUTOINSTALL="--defaultdeps"
PERL_MM_USE_DEFAULT="1"
@INC:
/home/perltest/.cpan/build/Chemistry-File-SMILES-0.47-If_i5P/blib/arch
/home/perltest/.cpan/build/Chemistry-File-SMILES-0.47-If_i5P/blib/lib
/home/perltest/.cpan/build/Chemistry-Ring-0.20-aNJ22T/blib/arch
/home/perltest/.cpan/build/Chemistry-Ring-0.20-aNJ22T/blib/lib
/home/perltest/.cpan/build/Statistics-Regression-0.53-1vzNgk/blib/arch
/home/perltest/.cpan/build/Statistics-Regression-0.53-1vzNgk/blib/lib
/home/perltest/.cpan/build/Chemistry-Canonicalize-0.11-gwrFUP/blib/arch
/home/perltest/.cpan/build/Chemistry-Canonicalize-0.11-gwrFUP/blib/lib
/home/perltest/.cpan/build/Chemistry-Bond-Find-0.23-lsdhRT/blib/arch
/home/perltest/.cpan/build/Chemistry-Bond-Find-0.23-lsdhRT/blib/lib
/home/perltest/.cpan/build/Chemistry-Pattern-0.27-dXfYzP/blib/arch
/home/perltest/.cpan/build/Chemistry-Pattern-0.27-dXfYzP/blib/lib
/home/perltest/.cpan/build/Chemistry-Mol-0.37-Rn9G54/blib/arch
/home/perltest/.cpan/build/Chemistry-Mol-0.37-Rn9G54/blib/lib
/home/perltest/.cpan/build/Math-VectorReal-1.02-mirp0j/blib/arch
/home/perltest/.cpan/build/Math-VectorReal-1.02-mirp0j/blib/lib
/home/perltest/perl5/perlbrew/perls/perl-5.20.2/lib/site_perl/5.20.2/x86_64-linux
/home/perltest/perl5/perlbrew/perls/perl-5.20.2/lib/site_perl/5.20.2
/home/perltest/perl5/perlbrew/perls/perl-5.20.2/lib/5.20.2/x86_64-linux
/home/perltest/perl5/perlbrew/perls/perl-5.20.2/lib/5.20.2
.