FASTX-Reader v1.12.1-TRIAL Perl 5 v5.30.2 i86pc-solaris-thread-multi-64
- Status
- Pass
- From
- David Cantrell (DCANTRELL)
- Dist
-
FASTX-Reader v1.12.1-TRIAL
- Platform
- Perl 5 v5.30.2 i86pc-solaris-thread-multi-64
- Date
- 2023-09-29 23:03:20
- ID
- 624f5de4-5f1c-11ee-bdde-a37d3131aa8c
This distribution has been tested as part of the CPAN Testers
project, supporting the Perl programming language. See
http://wiki.cpantesters.org/ for more information or email
questions to cpan-testers-discuss@perl.org
--
Dear Andrea Telatin,
This is a computer-generated report for FASTX-Reader-1.12.1-TRIAL
on perl 5.30.2, created by CPAN-Reporter-1.2018.
Thank you for uploading your work to CPAN. Congratulations!
All tests were successful.
Sections of this report:
* Tester comments
* Program output
* Prerequisites
* Environment and other context
------------------------------
TESTER COMMENTS
------------------------------
Additional comments from tester:
this report is from an automated smoke testing program
and was not reviewed by a human for accuracy
------------------------------
PROGRAM OUTPUT
------------------------------
Output from '/usr/bin/make test':
PERL_DL_NONLAZY=1 "/home/david/cpantesting/perl-5.30.2/bin/perl" "-MExtUtils::Command::MM" "-MTest::Harness" "-e" "undef *Test::Harness::Switches; test_harness(0, 'blib/lib', 'blib/arch')" t/*.t
t/01_basic_test.t ................. ok
t/02_parse_crlf.t ................. ok
t/02_parse_fasta.t ................ ok
t/02_preload.t .................... ok
t/02_preload_obj.t ................ ok
t/03_parse_fastq.t ................ ok
t/04_stdin_1.t .................... ok
t/04_stdin_2.t .................... ok
t/05_fasta_comments.t ............. ok
t/06_fastq_comments.t ............. ok
t/07_fastq_parser_1.t ............. ok
t/07_fastq_parser_2.t ............. ok
t/08_gzipped_fastq.t .............. ok
t/08_gzipped_fastq_alternative.t .. ok
t/09_error_nofile.t ............... ok
t/10_error_fastq.t ................ ok
t/11_get_format.t ................. ok
t/12_gzipped_fasta.t .............. ok
t/13_illumina_read.t .............. ok
t/14_illumina_nonillumina.t ....... ok
t/15_parse_pe.t ................... ok
t/16_parse_interleaved.t .......... ok
t/17_parse_pe_autopair.t .......... ok
t/18_parse_pe_bad_names.t ......... ok
t/19_parse_pe_rev.t ............... ok
t/20_parse_pe_bad_interleaved.t ... ok
t/30_helper.t ..................... ok
t/31_helper_fun.t ................. ok
t/40_two_fastas.t ................. ok
t/40_two_files.t .................. ok
t/51_seq_basic_1.t ................ ok
t/51_seq_basic_new.t .............. ok
t/52_methods_seq.t ................ ok
t/53_Seq_asfastx.t ................ ok
t/53_with_fastxseq.t .............. ok
t/54_copy.t ....................... ok
t/54_invalid_seq.t ................ ok
t/54_Seq_asfastx_bad.t ............ ok
t/54_Seq_isfastx.t ................ ok
t/55_next.t ....................... ok
t/55_nextobj.t .................... ok
t/55_Seq_slice.t .................. ok
t/56_Seq_flags.t .................. ok
t/57_Seq_Trans.t .................. ok
t/61_seq_qual.t ................... ok
t/62_seq_qualities.t .............. ok
t/release-00-pod.t ................ skipped: these tests are for release candidate testing
t/release-01-pod-coverage.t ....... skipped: these tests are for release candidate testing
t/release-03-minimum-standards.t .. skipped: these tests are for release candidate testing
t/release-05-changes.t ............ skipped: these tests are for release candidate testing
t/release-check-version.t ......... skipped: these tests are for release candidate testing
All tests successful.
Files=51, Tests=444, 17 wallclock secs ( 0.57 usr 0.41 sys + 12.94 cusr 3.33 csys = 17.25 CPU)
Result: PASS
------------------------------
PREREQUISITES
------------------------------
Prerequisite modules loaded:
requires:
Module Need Have
------------------- ----- --------
Capture::Tiny 0.40 0.48
Carp 1.2 1.50
Data::Dumper 2.1 2.183
File::Fetch 0 0.56
FindBin 1.3 1.53
JSON::PP 0 4.16
perl 5.016 5.030002
PerlIO::encoding 0 0.27
Time::HiRes 0 1.9764
build_requires:
Module Need Have
------------------- ----- --------
ExtUtils::MakeMaker 0 7.70
configure_requires:
Module Need Have
------------------- ----- --------
ExtUtils::MakeMaker 0 7.70
------------------------------
ENVIRONMENT AND OTHER CONTEXT
------------------------------
Environment variables:
AUTOMATED_TESTING = 1
LANG = en_GB.UTF-8
NONINTERACTIVE_TESTING = 1
PATH = /home/david/bin:/home/david/perl5/perlbrew/bin:/home/david/perl5/perlbrew/perls/perl-5.32.0/bin:/home/david/bin:/home/david/.cargo/bin:/home/david/bin:/usr/bin:/usr/sbin:/sbin:/usr/gnu/bin:/opt/ooce/bin:/home/david/.fzf.git/bin:/opt/ooce/bin:/opt/ooce/bin
PERL = 5.30.2
PERL5LIB =
PERL5OPT =
PERL5_CPANPLUS_IS_RUNNING = 12750
PERL5_CPAN_IS_RUNNING = 12750
PERLBREW_HOME = /home/david/.perlbrew
PERLBREW_MANPATH = /home/david/perl5/perlbrew/perls/perl-5.32.0/man
PERLBREW_PATH = /home/david/perl5/perlbrew/bin:/home/david/perl5/perlbrew/perls/perl-5.32.0/bin
PERLBREW_PERL = perl-5.32.0
PERLBREW_ROOT = /home/david/perl5/perlbrew
PERLBREW_SHELLRC_VERSION = 0.89
PERLBREW_VERSION = 0.89
PERLVER = 5.30.2
PERL_INLINE_DIRECTORY = /home/david/.Inline-5.30.2
PERL_MM_USE_DEFAULT = 1
PERL_USE_UNSAFE_INC = 0
SHELL = /bin/bash
TERM = screen
Perl special variables (and OS-specific diagnostics, for MSWin32):
$^X = /home/david/cpantesting/perl-5.30.2/bin/perl
$UID/$EUID = 100 / 100
$GID = 1 1 100
$EGID = 1 1 100
Perl module toolchain versions installed:
Module Have
------------------- --------
CPAN 2.22
CPAN::Meta 2.150010
Cwd 3.75
ExtUtils::CBuilder 0.280236
ExtUtils::Command 7.70
ExtUtils::Install 2.22
ExtUtils::MakeMaker 7.70
ExtUtils::Manifest 1.75
ExtUtils::ParseXS 3.44
File::Spec 3.75
JSON 4.10
JSON::PP 4.16
Module::Build 0.4234
Module::Signature n/a
Parse::CPAN::Meta 2.150010
Test::Harness 3.44
Test::More 1.302195
YAML 1.30
YAML::Syck n/a
version 0.9929
--
Summary of my perl5 (revision 5 version 30 subversion 2) configuration:
Platform:
osname=solaris
osvers=2.11
archname=i86pc-solaris-thread-multi-64
uname='sunos cpantesting-illumos 5.11 omnios-r151036-4a32ffb911 i86pc i386 i86pc '
config_args='-de -Dcc=gcc -Dprefix=/home/david/cpantesting/perl-5.30.2 -Dusethreads'
hint=recommended
useposix=true
d_sigaction=define
useithreads=define
usemultiplicity=define
use64bitint=define
use64bitall=define
uselongdouble=undef
usemymalloc=n
default_inc_excludes_dot=define
bincompat5005=undef
Compiler:
cc='gcc'
ccflags ='-D_REENTRANT -fwrapv -fno-strict-aliasing -pipe -fstack-protector-strong -m64 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -DPERL_USE_SAFE_PUTENV'
optimize='-O'
cppflags='-D_REENTRANT -fwrapv -fno-strict-aliasing -pipe -fstack-protector-strong'
ccversion=''
gccversion='9.3.0'
gccosandvers=''
intsize=4
longsize=8
ptrsize=8
doublesize=8
byteorder=12345678
doublekind=3
d_longlong=define
longlongsize=8
d_longdbl=define
longdblsize=16
longdblkind=3
ivtype='long'
ivsize=8
nvtype='double'
nvsize=8
Off_t='off_t'
lseeksize=8
alignbytes=8
prototype=define
Linker and Libraries:
ld='gcc'
ldflags =' -fstack-protector-strong -L/usr/gnu/lib -m64 '
libpth=/opt/gcc-9/lib /opt/gcc-9/lib/gcc/x86_64-pc-solaris2.11/9.3.0/include-fixed /usr/lib /usr/gnu/lib /usr/ccs/lib
libs=-lpthread -lsocket -lnsl -ldl -lm -lc
perllibs=-lpthread -lsocket -lnsl -ldl -lm -lc
libc=/lib/libc.so
so=so
useshrplib=true
libperl=libperl.so
gnulibc_version=''
Dynamic Linking:
dlsrc=dl_dlopen.xs
dlext=so
d_dlsymun=undef
ccdlflags=' -R /home/david/cpantesting/perl-5.30.2/lib/5.30.2/i86pc-solaris-thread-multi-64/CORE'
cccdlflags='-fPIC'
lddlflags=' -shared -m64 -L/usr/gnu/lib -fstack-protector-strong'
Characteristics of this binary (from libperl):
Compile-time options:
HAS_TIMES
MULTIPLICITY
PERLIO_LAYERS
PERL_COPY_ON_WRITE
PERL_DONT_CREATE_GVSV
PERL_IMPLICIT_CONTEXT
PERL_MALLOC_WRAP
PERL_OP_PARENT
PERL_PRESERVE_IVUV
PERL_USE_SAFE_PUTENV
USE_64_BIT_ALL
USE_64_BIT_INT
USE_ITHREADS
USE_LARGE_FILES
USE_LOCALE
USE_LOCALE_COLLATE
USE_LOCALE_CTYPE
USE_LOCALE_NUMERIC
USE_LOCALE_TIME
USE_PERLIO
USE_PERL_ATOF
USE_REENTRANT_API
USE_THREAD_SAFE_LOCALE
Built under solaris
Compiled at Dec 12 2020 00:49:07
%ENV:
PERL="5.30.2"
PERL5LIB=""
PERL5OPT=""
PERL5_CPANPLUS_IS_RUNNING="12750"
PERL5_CPAN_IS_RUNNING="12750"
PERLBREW_HOME="/home/david/.perlbrew"
PERLBREW_MANPATH="/home/david/perl5/perlbrew/perls/perl-5.32.0/man"
PERLBREW_PATH="/home/david/perl5/perlbrew/bin:/home/david/perl5/perlbrew/perls/perl-5.32.0/bin"
PERLBREW_PERL="perl-5.32.0"
PERLBREW_ROOT="/home/david/perl5/perlbrew"
PERLBREW_SHELLRC_VERSION="0.89"
PERLBREW_VERSION="0.89"
PERLVER="5.30.2"
PERL_INLINE_DIRECTORY="/home/david/.Inline-5.30.2"
PERL_MM_USE_DEFAULT="1"
PERL_USE_UNSAFE_INC="0"
@INC:
/home/david/cpantesting/perl-5.30.2/lib/site_perl/5.30.2/i86pc-solaris-thread-multi-64
/home/david/cpantesting/perl-5.30.2/lib/site_perl/5.30.2
/home/david/cpantesting/perl-5.30.2/lib/5.30.2/i86pc-solaris-thread-multi-64
/home/david/cpantesting/perl-5.30.2/lib/5.30.2