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From: metabase:user:314402c4-2aae-11df-837a-5e0a49663a4f
Subject: FAIL Bio-Das-Lite-2.11 v5.20.1 GNU/Linux
Date: 2016-09-02T07:30:58Z
This distribution has been tested as part of the CPAN Testers
project, supporting the Perl programming language. See
http://wiki.cpantesters.org/ for more information or email
questions to cpan-testers-discuss@perl.org
--
Dear Roger Pettett,
This is a computer-generated report for Bio-Das-Lite-2.11
on perl 5.20.1, created by CPAN-Reporter-1.2018.
Thank you for uploading your work to CPAN. However, there was a problem
testing your distribution.
If you think this report is invalid, please consult the CPAN Testers Wiki
for suggestions on how to avoid getting FAIL reports for missing library
or binary dependencies, unsupported operating systems, and so on:
http://wiki.cpantesters.org/wiki/CPANAuthorNotes
Sections of this report:
* Tester comments
* Program output
* Prerequisites
* Environment and other context
------------------------------
TESTER COMMENTS
------------------------------
Additional comments from tester:
none provided
------------------------------
PROGRAM OUTPUT
------------------------------
Output from './Build test':
t/00-critic.t ............... skipped: Author test. Set $ENV{TEST_AUTHOR} to a true value to run.
t/00-distribution.t ......... ok
t/00-pod.t .................. ok
t/00-podcoverage.t .......... ok
# Failed test 'feature-by-id element was a hash'
# at t/01-general.t line 52.
# Looks like you failed 1 test of 7.
t/01-general.t ..............
Dubious, test returned 1 (wstat 256, 0x100)
Failed 1/7 subtests
# Failed test 'HTTP OK, X-DAS OK (code)'
# at t/02-statuscodes.t line 27.
# got: '500'
# expected: '200'
# Failed test 'HTTP OK, X-DAS OK (message)'
# at t/02-statuscodes.t line 28.
# got: 'Internal Server Error'
# expected: 'OK'
# Failed test 'HTTP OK, X-DAS-Status error (code)'
# at t/02-statuscodes.t line 27.
# got: '500'
# expected: '401'
# Failed test 'HTTP OK, X-DAS-Status error (message)'
# at t/02-statuscodes.t line 28.
# got: 'Internal Server Error'
# expected: 'Bad data source (data source unknown)'
# Looks like you failed 4 tests of 6.
t/02-statuscodes.t ..........
Dubious, test returned 4 (wstat 1024, 0x400)
Failed 4/6 subtests
# Failed test 'dsns call returned OK status (service http://das.sanger.ac.uk/das status 410 Gone)'
# at t/05-singledsn.t line 38.
# Failed test 'dsns call gave a arrayref value (service http://das.sanger.ac.uk/das)'
# at t/05-singledsn.t line 39.
# Failed test 'dsns call returned at least one source (service http://das.sanger.ac.uk/das)'
# at t/05-singledsn.t line 41.
# Failed test 'dsns call returned OK status (service http://das.ensembl.org/das/dsn status 410 Gone)'
# at t/05-singledsn.t line 38.
# Failed test 'dsns call gave a arrayref value (service http://das.ensembl.org/das/dsn)'
# at t/05-singledsn.t line 39.
# Failed test 'dsns call returned at least one source (service http://das.ensembl.org/das/dsn)'
# at t/05-singledsn.t line 41.
# Failed test 'dsns call returned OK status (service http://das.ensembl.org/das/dsn#foo status 410 Gone)'
# at t/05-singledsn.t line 38.
# Failed test 'dsns call gave a arrayref value (service http://das.ensembl.org/das/dsn#foo)'
# at t/05-singledsn.t line 39.
# Failed test 'dsns call returned at least one source (service http://das.ensembl.org/das/dsn#foo)'
# at t/05-singledsn.t line 41.
# Looks like you failed 9 tests of 33.
t/05-singledsn.t ............
Dubious, test returned 9 (wstat 2304, 0x900)
Failed 9/33 subtests
t/06-singledsn-singleseg.t .. ok
# Failed test 'features hash contains an array'
# at t/07-singledsn-multiseg.t line 27.
# got: ''
# expected: 'ARRAY'
Can't use an undefined value as an ARRAY reference at t/07-singledsn-multiseg.t line 39.
# Looks like your test exited with 115 just after 3.
t/07-singledsn-multiseg.t ...
Dubious, test returned 115 (wstat 29440, 0x7300)
Failed 8/10 subtests
# Failed test 'dsns call returned OK status (status is 410 Gone)'
# at t/10-multidsn.t line 34.
# Failed test 'dsns call gave a arrayref value for the one key'
# at t/10-multidsn.t line 36.
Can't use an undefined value as an ARRAY reference at t/10-multidsn.t line 38.
# Looks like your test exited with 115 just after 9.
t/10-multidsn.t .............
Dubious, test returned 115 (wstat 29440, 0x7300)
Failed 4/11 subtests
t/20-authentication.t ....... ok
Error from test server on port 10000 - An error happened: Couldn't connect to server (7)
at /opt/perl-5.20.1/lib/site_perl/5.20.1/WWW/Curl/Simple.pm line 28.
Error from test server on port 10001 - An error happened: Couldn't connect to server (7)
at /opt/perl-5.20.1/lib/site_perl/5.20.1/WWW/Curl/Simple.pm line 28.
Error from test server on port 10002 - An error happened: Couldn't connect to server (7)
at /opt/perl-5.20.1/lib/site_perl/5.20.1/WWW/Curl/Simple.pm line 28.
Error from test server on port 10003 - An error happened: Couldn't connect to server (7)
at /opt/perl-5.20.1/lib/site_perl/5.20.1/WWW/Curl/Simple.pm line 28.
Error from test server on port 10004 - An error happened: Couldn't connect to server (7)
at /opt/perl-5.20.1/lib/site_perl/5.20.1/WWW/Curl/Simple.pm line 28.
Error from test server on port 10005 - An error happened: Couldn't connect to server (7)
at /opt/perl-5.20.1/lib/site_perl/5.20.1/WWW/Curl/Simple.pm line 28.
Error from test server on port 10006 - An error happened: Couldn't connect to server (7)
at /opt/perl-5.20.1/lib/site_perl/5.20.1/WWW/Curl/Simple.pm line 28.
Error from test server on port 10007 - An error happened: Couldn't connect to server (7)
at /opt/perl-5.20.1/lib/site_perl/5.20.1/WWW/Curl/Simple.pm line 28.
Error from test server on port 10008 - An error happened: Couldn't connect to server (7)
at /opt/perl-5.20.1/lib/site_perl/5.20.1/WWW/Curl/Simple.pm line 28.
Error from test server on port 10009 - An error happened: Couldn't connect to server (7)
at /opt/perl-5.20.1/lib/site_perl/5.20.1/WWW/Curl/Simple.pm line 28.
Error from test server on port 10010 - An error happened: Couldn't connect to server (7)
at /opt/perl-5.20.1/lib/site_perl/5.20.1/WWW/Curl/Simple.pm line 28.
# Failed test 'run test proxy server'
# at t/21-proxy.t line 107.
# Looks like you planned 11 tests but ran 1.
# Looks like you failed 1 test of 1 run.
t/21-proxy.t ................
Dubious, test returned 1 (wstat 256, 0x100)
Failed 11/11 subtests
t/40-dna.t .................. ok
t/45-sequence.t ............. ok
t/50-entry_points.t ......... ok
t/60-features.t ............. ok
t/60-features_chunked.t ..... ok
t/60-features_empty.t ....... ok
t/61-features_group.t ....... ok
t/70-alignment.t ............ ok
t/80-structure.t ............ ok
t/90-sources.t .............. ok
Test Summary Report
-------------------
t/01-general.t (Wstat: 256 Tests: 7 Failed: 1)
Failed test: 7
Non-zero exit status: 1
t/02-statuscodes.t (Wstat: 1024 Tests: 6 Failed: 4)
Failed tests: 1-4
Non-zero exit status: 4
t/05-singledsn.t (Wstat: 2304 Tests: 33 Failed: 9)
Failed tests: 8-10, 19-21, 30-32
Non-zero exit status: 9
t/07-singledsn-multiseg.t (Wstat: 29440 Tests: 3 Failed: 1)
Failed test: 3
Non-zero exit status: 115
Parse errors: Bad plan. You planned 10 tests but ran 3.
t/10-multidsn.t (Wstat: 29440 Tests: 9 Failed: 2)
Failed tests: 8-9
Non-zero exit status: 115
Parse errors: Bad plan. You planned 11 tests but ran 9.
t/21-proxy.t (Wstat: 256 Tests: 1 Failed: 1)
Failed test: 1
Non-zero exit status: 1
Parse errors: Bad plan. You planned 11 tests but ran 1.
Files=22, Tests=118, 3 wallclock secs ( 0.08 usr 0.09 sys + 1.73 cusr 0.81 csys = 2.71 CPU)
Result: FAIL
Failed 6/22 test programs. 18/118 subtests failed.
------------------------------
PREREQUISITES
------------------------------
Prerequisite modules loaded:
requires:
Module Need Have
-------------- ---- --------
Carp 1.02 1.38
English 1.01 1.09
HTTP::Response 1.49 6.11
Readonly 1.03 2.05
WWW::Curl 4.07 4.17
build_requires:
Module Need Have
-------------- ---- --------
Test::More 0.8 1.302052
configure_requires:
Module Need Have
-------------- ---- --------
Module::Build 0.36 0.4220
------------------------------
ENVIRONMENT AND OTHER CONTEXT
------------------------------
Environment variables:
LANG = C
PATH = /usr/local/bin:/usr/bin:/bin:/usr/local/sbin:/usr/sbin:/sbin:/home/cpansand/bin/linux-gnu:/home/cpansand/bin/sh:/home/cpansand/bin:/usr/games:/home/cpansand/devel:/home/eserte/src/srezic-misc/scripts
PERL5LIB =
PERL5OPT =
PERL5_CPANPLUS_IS_RUNNING = 1757
PERL5_CPAN_IS_RUNNING = 1757
PERL5_CPAN_IS_RUNNING_IN_RECURSION = 32519,1757
PERLDOC = -MPod::Perldoc::ToTextOverstrike
PERL_BATCH = yes
PERL_CANARY_STABILITY_NOPROMPT = 1
PERL_CPAN_REPORTER_CONFIG = /run/user/1023/cpansmoker/2016090206/cpanreporter_000_config.ini
PERL_EXTUTILS_AUTOINSTALL = --defaultdeps
PERL_USE_UNSAFE_INC = 1
SHELL = /bin/zsh
TERM = screen
TMPDIR = /run/user/1023/cpansmoker/2016090206
Perl special variables (and OS-specific diagnostics, for MSWin32):
$^X = /bbbike/perl-5.20.1/bin/perl
$UID/$EUID = 1023 / 1023
$GID = 1023 1023
$EGID = 1023 1023
Perl module toolchain versions installed:
Module Have
------------------- --------
CPAN 2.14
CPAN::Meta 2.150010
Cwd 3.48
ExtUtils::CBuilder 0.280224
ExtUtils::Command 7.24
ExtUtils::Install 1.67
ExtUtils::MakeMaker 7.24
ExtUtils::Manifest 1.70
ExtUtils::ParseXS 3.24
File::Spec 3.48
JSON 2.90
JSON::PP 2.27400
Module::Build 0.4220
Module::Signature 0.80
Parse::CPAN::Meta 2.150010
Test::Harness 3.36
Test::More 1.302052
YAML 1.15
YAML::Syck 1.29
version 0.9916
--
Summary of my perl5 (revision 5 version 20 subversion 1) configuration:
Platform:
osname=linux, osvers=3.16.0-4-amd64, archname=x86_64-linux
uname='linux eserte 3.16.0-4-amd64 #1 smp debian 3.16.7-ckt25-2 (2016-04-08) x86_64 gnulinux '
config_args='-ds -e -Dprefix=/opt/perl-5.20.1 -Dcf_email=srezic@cpan.org'
hint=recommended, useposix=true, d_sigaction=define
useithreads=undef, usemultiplicity=undef
use64bitint=define, use64bitall=define, uselongdouble=undef
usemymalloc=n, bincompat5005=undef
Compiler:
cc='cc', ccflags ='-fwrapv -fno-strict-aliasing -pipe -fstack-protector -I/usr/local/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64',
optimize='-O2',
cppflags='-fwrapv -fno-strict-aliasing -pipe -fstack-protector -I/usr/local/include'
ccversion='', gccversion='4.9.2', gccosandvers=''
intsize=4, longsize=8, ptrsize=8, doublesize=8, byteorder=12345678
d_longlong=define, longlongsize=8, d_longdbl=define, longdblsize=16
ivtype='long', ivsize=8, nvtype='double', nvsize=8, Off_t='off_t', lseeksize=8
alignbytes=8, prototype=define
Linker and Libraries:
ld='cc', ldflags =' -fstack-protector -L/usr/local/lib'
libpth=/usr/local/lib /usr/lib/gcc/x86_64-linux-gnu/4.9/include-fixed /usr/include/x86_64-linux-gnu /usr/lib /lib/x86_64-linux-gnu /lib/../lib /usr/lib/x86_64-linux-gnu /usr/lib/../lib /lib
libs=-lnsl -lgdbm -ldb -ldl -lm -lcrypt -lutil -lc -lgdbm_compat
perllibs=-lnsl -ldl -lm -lcrypt -lutil -lc
libc=libc-2.19.so, so=so, useshrplib=false, libperl=libperl.a
gnulibc_version='2.19'
Dynamic Linking:
dlsrc=dl_dlopen.xs, dlext=so, d_dlsymun=undef, ccdlflags='-Wl,-E'
cccdlflags='-fPIC', lddlflags='-shared -O2 -L/usr/local/lib -fstack-protector'
Characteristics of this binary (from libperl):
Compile-time options: HAS_TIMES PERLIO_LAYERS PERL_DONT_CREATE_GVSV
PERL_HASH_FUNC_ONE_AT_A_TIME_HARD PERL_MALLOC_WRAP
PERL_NEW_COPY_ON_WRITE PERL_PRESERVE_IVUV
USE_64_BIT_ALL USE_64_BIT_INT USE_LARGE_FILES
USE_LOCALE USE_LOCALE_COLLATE USE_LOCALE_CTYPE
USE_LOCALE_NUMERIC USE_PERLIO USE_PERL_ATOF
Built under linux
Compiled at May 7 2016 16:00:15
%ENV:
PERL5LIB=""
PERL5OPT=""
PERL5_CPANPLUS_IS_RUNNING="1757"
PERL5_CPAN_IS_RUNNING="1757"
PERL5_CPAN_IS_RUNNING_IN_RECURSION="32519,1757"
PERLDOC="-MPod::Perldoc::ToTextOverstrike"
PERL_BATCH="yes"
PERL_CANARY_STABILITY_NOPROMPT="1"
PERL_CPAN_REPORTER_CONFIG="/run/user/1023/cpansmoker/2016090206/cpanreporter_000_config.ini"
PERL_EXTUTILS_AUTOINSTALL="--defaultdeps"
PERL_USE_UNSAFE_INC="1"
@INC:
/opt/perl-5.20.1/lib/site_perl/5.20.1/x86_64-linux
/opt/perl-5.20.1/lib/site_perl/5.20.1
/opt/perl-5.20.1/lib/5.20.1/x86_64-linux
/opt/perl-5.20.1/lib/5.20.1
.