Proch-N50 v1.7.0 Perl 5 v5.12.0 x86_64-linux-ld
- Status
- Na
- From
- Andreas J. König (ANDK)
- Dist
-
Proch-N50 v1.7.0
- Platform
- Perl 5 v5.12.0 x86_64-linux-ld
- Date
- 2025-02-26 22:43:38
- ID
- 1ef019fe-f493-11ef-be60-c407c72789e9
This distribution has been tested as part of the CPAN Testers
project, supporting the Perl programming language. See
http://wiki.cpantesters.org/ for more information or email
questions to cpan-testers-discuss@perl.org
--
Dear Andrea Telatin,
This is a computer-generated report for Proch-N50-1.7.0
on perl 5.12.0, created by CPAN-Reporter-1.2019.
Thank you for uploading your work to CPAN. While attempting to build or test
this distribution, the distribution signaled that support is not available
either for this operating system or this version of Perl. Nevertheless, any
diagnostic output produced is provided below for reference. If this is not
what you expect, you may wish to consult the CPAN Testers Wiki:
http://wiki.cpantesters.org/wiki/CPANAuthorNotes
Sections of this report:
* Tester comments
* Program output
* Prerequisites
* Environment and other context
------------------------------
TESTER COMMENTS
------------------------------
Additional comments from tester:
this report is from an automated smoke testing program
and was not reviewed by a human for accuracy
------------------------------
PROGRAM OUTPUT
------------------------------
Output from '/usr/bin/make test':
PERL_DL_NONLAZY=1 "/home/sand/src/perl/repoperls/installed-perls/host/k93msid/v5.12.0/fc43/bin/perl" "-MExtUtils::Command::MM" "-MTest::Harness" "-e" "undef *Test::Harness::Switches; test_harness(0, 'blib/lib', 'blib/arch')" t/*.t
# Failed test 'use FASTX::Seq;'
# at t/10-Requires_FASTX-reader-seq.t line 6.
# Tried to use 'FASTX::Seq'.
# Error: Can't locate FASTX/Seq.pm in @INC (@INC contains: /tmp/loop_over_bdir-2639088-KpvPVG/Proch-N50-1.7.0-0/blib/lib /tmp/loop_over_bdir-2639088-KpvPVG/Proch-N50-1.7.0-0/blib/arch /home/sand/src/perl/repoperls/installed-perls/host/k93msid/v5.12.0/fc43/lib/site_perl/5.12.0/x86_64-linux-ld /home/sand/src/perl/repoperls/installed-perls/host/k93msid/v5.12.0/fc43/lib/site_perl/5.12.0 /home/sand/src/perl/repoperls/installed-perls/host/k93msid/v5.12.0/fc43/lib/5.12.0/x86_64-linux-ld /home/sand/src/perl/repoperls/installed-perls/host/k93msid/v5.12.0/fc43/lib/5.12.0 .) at t/10-Requires_FASTX-reader-seq.t line 6.
# BEGIN failed--compilation aborted at t/10-Requires_FASTX-reader-seq.t line 6.
# Looks like you failed 1 test of 1.
t/10-Requires_FASTX-reader-seq.t ...
Dubious, test returned 1 (wstat 256, 0x100)
Failed 1/1 subtests
# Failed test 'use Proch::N50;'
# at t/10_Load_Modules.t line 6.
# Tried to use 'Proch::N50'.
# Error: Can't locate FASTX/Reader.pm in @INC (@INC contains: /tmp/loop_over_bdir-2639088-KpvPVG/Proch-N50-1.7.0-0/blib/lib /tmp/loop_over_bdir-2639088-KpvPVG/Proch-N50-1.7.0-0/blib/arch /home/sand/src/perl/repoperls/installed-perls/host/k93msid/v5.12.0/fc43/lib/site_perl/5.12.0/x86_64-linux-ld /home/sand/src/perl/repoperls/installed-perls/host/k93msid/v5.12.0/fc43/lib/site_perl/5.12.0 /home/sand/src/perl/repoperls/installed-perls/host/k93msid/v5.12.0/fc43/lib/5.12.0/x86_64-linux-ld /home/sand/src/perl/repoperls/installed-perls/host/k93msid/v5.12.0/fc43/lib/5.12.0 .) at /tmp/loop_over_bdir-2639088-KpvPVG/Proch-N50-1.7.0-0/blib/lib/Proch/N50.pm line 10.
# BEGIN failed--compilation aborted at /tmp/loop_over_bdir-2639088-KpvPVG/Proch-N50-1.7.0-0/blib/lib/Proch/N50.pm line 10.
# Compilation failed in require at t/10_Load_Modules.t line 6.
# BEGIN failed--compilation aborted at t/10_Load_Modules.t line 6.
# Failed test 'use Proch::Seqfu;'
# at t/10_Load_Modules.t line 7.
# Tried to use 'Proch::Seqfu'.
# Error: Perl v5.14.0 required--this is only v5.12.0, stopped at /tmp/loop_over_bdir-2639088-KpvPVG/Proch-N50-1.7.0-0/blib/lib/Proch/Seqfu.pm line 6.
# BEGIN failed--compilation aborted at /tmp/loop_over_bdir-2639088-KpvPVG/Proch-N50-1.7.0-0/blib/lib/Proch/Seqfu.pm line 6.
# Compilation failed in require at t/10_Load_Modules.t line 7.
# BEGIN failed--compilation aborted at t/10_Load_Modules.t line 7.
# Looks like you failed 2 tests of 2.
t/10_Load_Modules.t ................
Dubious, test returned 2 (wstat 512, 0x200)
Failed 2/2 subtests
# Failed test 'use FASTX::Reader;'
# at t/10_Requires_FASTX-reader.t line 6.
# Tried to use 'FASTX::Reader'.
# Error: Can't locate FASTX/Reader.pm in @INC (@INC contains: /tmp/loop_over_bdir-2639088-KpvPVG/Proch-N50-1.7.0-0/blib/lib /tmp/loop_over_bdir-2639088-KpvPVG/Proch-N50-1.7.0-0/blib/arch /home/sand/src/perl/repoperls/installed-perls/host/k93msid/v5.12.0/fc43/lib/site_perl/5.12.0/x86_64-linux-ld /home/sand/src/perl/repoperls/installed-perls/host/k93msid/v5.12.0/fc43/lib/site_perl/5.12.0 /home/sand/src/perl/repoperls/installed-perls/host/k93msid/v5.12.0/fc43/lib/5.12.0/x86_64-linux-ld /home/sand/src/perl/repoperls/installed-perls/host/k93msid/v5.12.0/fc43/lib/5.12.0 .) at t/10_Requires_FASTX-reader.t line 6.
# BEGIN failed--compilation aborted at t/10_Requires_FASTX-reader.t line 6.
# Looks like you failed 1 test of 1.
t/10_Requires_FASTX-reader.t .......
Dubious, test returned 1 (wstat 256, 0x100)
Failed 1/1 subtests
Can't locate FASTX/Reader.pm in @INC (@INC contains: /tmp/loop_over_bdir-2639088-KpvPVG/Proch-N50-1.7.0-0/blib/lib /tmp/loop_over_bdir-2639088-KpvPVG/Proch-N50-1.7.0-0/blib/arch /home/sand/src/perl/repoperls/installed-perls/host/k93msid/v5.12.0/fc43/lib/site_perl/5.12.0/x86_64-linux-ld /home/sand/src/perl/repoperls/installed-perls/host/k93msid/v5.12.0/fc43/lib/site_perl/5.12.0 /home/sand/src/perl/repoperls/installed-perls/host/k93msid/v5.12.0/fc43/lib/5.12.0/x86_64-linux-ld /home/sand/src/perl/repoperls/installed-perls/host/k93msid/v5.12.0/fc43/lib/5.12.0 .) at /tmp/loop_over_bdir-2639088-KpvPVG/Proch-N50-1.7.0-0/blib/lib/Proch/N50.pm line 10.
BEGIN failed--compilation aborted at /tmp/loop_over_bdir-2639088-KpvPVG/Proch-N50-1.7.0-0/blib/lib/Proch/N50.pm line 10.
Compilation failed in require at t/11_calculateN50.t line 3.
BEGIN failed--compilation aborted at t/11_calculateN50.t line 3.
t/11_calculateN50.t ................
Dubious, test returned 2 (wstat 512, 0x200)
No subtests run
Perl v5.14.0 required--this is only v5.12.0, stopped at /tmp/loop_over_bdir-2639088-KpvPVG/Proch-N50-1.7.0-0/blib/lib/Proch/Seqfu.pm line 6.
BEGIN failed--compilation aborted at /tmp/loop_over_bdir-2639088-KpvPVG/Proch-N50-1.7.0-0/blib/lib/Proch/Seqfu.pm line 6.
Compilation failed in require at t/11_seqfu.t line 3.
BEGIN failed--compilation aborted at t/11_seqfu.t line 3.
t/11_seqfu.t .......................
Dubious, test returned 255 (wstat 65280, 0xff00)
No subtests run
# Failed test 'require Proch::Seqfu;'
# at t/11_seqfu_ext.t line 9.
# Tried to require 'Proch::Seqfu'.
# Error: Perl v5.14.0 required--this is only v5.12.0, stopped at /tmp/loop_over_bdir-2639088-KpvPVG/Proch-N50-1.7.0-0/t/../lib/Proch/Seqfu.pm line 6.
# BEGIN failed--compilation aborted at /tmp/loop_over_bdir-2639088-KpvPVG/Proch-N50-1.7.0-0/t/../lib/Proch/Seqfu.pm line 6.
# Compilation failed in require at (eval 9) line 2.
# Failed test 'seqfu_version function is exported'
# at t/11_seqfu_ext.t line 13.
# Failed test 'has_seqfu function is exported'
# at t/11_seqfu_ext.t line 14.
# Failed test 'seqfu_version() executed without errors'
# at t/11_seqfu_ext.t line 21.
# got: 'Undefined subroutine &main::seqfu_version called at t/11_seqfu_ext.t line 19.
# '
# expected: ''
# seqfu_version returned: undef
# Failed test 'has_seqfu() executed without errors'
# at t/11_seqfu_ext.t line 29.
# got: 'Undefined subroutine &main::has_seqfu called at t/11_seqfu_ext.t line 27.
# '
# expected: ''
# Looks like you failed 5 tests of 6.
t/11_seqfu_ext.t ...................
Dubious, test returned 5 (wstat 1280, 0x500)
Failed 5/6 subtests
(less 1 skipped subtest: 0 okay)
Can't locate FASTX/Reader.pm in @INC (@INC contains: /tmp/loop_over_bdir-2639088-KpvPVG/Proch-N50-1.7.0-0/blib/lib /tmp/loop_over_bdir-2639088-KpvPVG/Proch-N50-1.7.0-0/blib/arch /home/sand/src/perl/repoperls/installed-perls/host/k93msid/v5.12.0/fc43/lib/site_perl/5.12.0/x86_64-linux-ld /home/sand/src/perl/repoperls/installed-perls/host/k93msid/v5.12.0/fc43/lib/site_perl/5.12.0 /home/sand/src/perl/repoperls/installed-perls/host/k93msid/v5.12.0/fc43/lib/5.12.0/x86_64-linux-ld /home/sand/src/perl/repoperls/installed-perls/host/k93msid/v5.12.0/fc43/lib/5.12.0 .) at /tmp/loop_over_bdir-2639088-KpvPVG/Proch-N50-1.7.0-0/blib/lib/Proch/N50.pm line 10.
BEGIN failed--compilation aborted at /tmp/loop_over_bdir-2639088-KpvPVG/Proch-N50-1.7.0-0/blib/lib/Proch/N50.pm line 10.
Compilation failed in require at t/12_new_stats.t line 3.
BEGIN failed--compilation aborted at t/12_new_stats.t line 3.
t/12_new_stats.t ...................
Dubious, test returned 2 (wstat 512, 0x200)
No subtests run
Can't locate FASTX/Reader.pm in @INC (@INC contains: /tmp/loop_over_bdir-2639088-KpvPVG/Proch-N50-1.7.0-0/blib/lib /tmp/loop_over_bdir-2639088-KpvPVG/Proch-N50-1.7.0-0/blib/arch /home/sand/src/perl/repoperls/installed-perls/host/k93msid/v5.12.0/fc43/lib/site_perl/5.12.0/x86_64-linux-ld /home/sand/src/perl/repoperls/installed-perls/host/k93msid/v5.12.0/fc43/lib/site_perl/5.12.0 /home/sand/src/perl/repoperls/installed-perls/host/k93msid/v5.12.0/fc43/lib/5.12.0/x86_64-linux-ld /home/sand/src/perl/repoperls/installed-perls/host/k93msid/v5.12.0/fc43/lib/5.12.0 .) at /tmp/loop_over_bdir-2639088-KpvPVG/Proch-N50-1.7.0-0/blib/lib/Proch/N50.pm line 10.
BEGIN failed--compilation aborted at /tmp/loop_over_bdir-2639088-KpvPVG/Proch-N50-1.7.0-0/blib/lib/Proch/N50.pm line 10.
Compilation failed in require at t/12_stats.t line 3.
BEGIN failed--compilation aborted at t/12_stats.t line 3.
t/12_stats.t .......................
Dubious, test returned 2 (wstat 512, 0x200)
No subtests run
Can't locate FASTX/Reader.pm in @INC (@INC contains: /tmp/loop_over_bdir-2639088-KpvPVG/Proch-N50-1.7.0-0/blib/lib /tmp/loop_over_bdir-2639088-KpvPVG/Proch-N50-1.7.0-0/blib/arch /home/sand/src/perl/repoperls/installed-perls/host/k93msid/v5.12.0/fc43/lib/site_perl/5.12.0/x86_64-linux-ld /home/sand/src/perl/repoperls/installed-perls/host/k93msid/v5.12.0/fc43/lib/site_perl/5.12.0 /home/sand/src/perl/repoperls/installed-perls/host/k93msid/v5.12.0/fc43/lib/5.12.0/x86_64-linux-ld /home/sand/src/perl/repoperls/installed-perls/host/k93msid/v5.12.0/fc43/lib/5.12.0 .) at /tmp/loop_over_bdir-2639088-KpvPVG/Proch-N50-1.7.0-0/blib/lib/Proch/N50.pm line 10.
BEGIN failed--compilation aborted at /tmp/loop_over_bdir-2639088-KpvPVG/Proch-N50-1.7.0-0/blib/lib/Proch/N50.pm line 10.
Compilation failed in require at t/13_json.t line 3.
BEGIN failed--compilation aborted at t/13_json.t line 3.
t/13_json.t ........................
Dubious, test returned 2 (wstat 512, 0x200)
No subtests run
Can't locate FASTX/Reader.pm in @INC (@INC contains: /tmp/loop_over_bdir-2639088-KpvPVG/Proch-N50-1.7.0-0/blib/lib /tmp/loop_over_bdir-2639088-KpvPVG/Proch-N50-1.7.0-0/blib/arch /home/sand/src/perl/repoperls/installed-perls/host/k93msid/v5.12.0/fc43/lib/site_perl/5.12.0/x86_64-linux-ld /home/sand/src/perl/repoperls/installed-perls/host/k93msid/v5.12.0/fc43/lib/site_perl/5.12.0 /home/sand/src/perl/repoperls/installed-perls/host/k93msid/v5.12.0/fc43/lib/5.12.0/x86_64-linux-ld /home/sand/src/perl/repoperls/installed-perls/host/k93msid/v5.12.0/fc43/lib/5.12.0 .) at /tmp/loop_over_bdir-2639088-KpvPVG/Proch-N50-1.7.0-0/blib/lib/Proch/N50.pm line 10.
BEGIN failed--compilation aborted at /tmp/loop_over_bdir-2639088-KpvPVG/Proch-N50-1.7.0-0/blib/lib/Proch/N50.pm line 10.
Compilation failed in require at t/14_bad_file.t line 3.
BEGIN failed--compilation aborted at t/14_bad_file.t line 3.
t/14_bad_file.t ....................
Dubious, test returned 2 (wstat 512, 0x200)
No subtests run
Can't locate FASTX/Reader.pm in @INC (@INC contains: /tmp/loop_over_bdir-2639088-KpvPVG/Proch-N50-1.7.0-0/blib/lib /tmp/loop_over_bdir-2639088-KpvPVG/Proch-N50-1.7.0-0/blib/arch /home/sand/src/perl/repoperls/installed-perls/host/k93msid/v5.12.0/fc43/lib/site_perl/5.12.0/x86_64-linux-ld /home/sand/src/perl/repoperls/installed-perls/host/k93msid/v5.12.0/fc43/lib/site_perl/5.12.0 /home/sand/src/perl/repoperls/installed-perls/host/k93msid/v5.12.0/fc43/lib/5.12.0/x86_64-linux-ld /home/sand/src/perl/repoperls/installed-perls/host/k93msid/v5.12.0/fc43/lib/5.12.0 .) at /tmp/loop_over_bdir-2639088-KpvPVG/Proch-N50-1.7.0-0/blib/lib/Proch/N50.pm line 10.
BEGIN failed--compilation aborted at /tmp/loop_over_bdir-2639088-KpvPVG/Proch-N50-1.7.0-0/blib/lib/Proch/N50.pm line 10.
Compilation failed in require at t/15_bad_json.t line 3.
BEGIN failed--compilation aborted at t/15_bad_json.t line 3.
t/15_bad_json.t ....................
Dubious, test returned 2 (wstat 512, 0x200)
No subtests run
t/20_External_Call.t ............... skipped: these tests are for release candidate testing
Can't locate FASTX/Reader.pm in @INC (@INC contains: /tmp/loop_over_bdir-2639088-KpvPVG/Proch-N50-1.7.0-0/blib/lib /tmp/loop_over_bdir-2639088-KpvPVG/Proch-N50-1.7.0-0/blib/arch /home/sand/src/perl/repoperls/installed-perls/host/k93msid/v5.12.0/fc43/lib/site_perl/5.12.0/x86_64-linux-ld /home/sand/src/perl/repoperls/installed-perls/host/k93msid/v5.12.0/fc43/lib/site_perl/5.12.0 /home/sand/src/perl/repoperls/installed-perls/host/k93msid/v5.12.0/fc43/lib/5.12.0/x86_64-linux-ld /home/sand/src/perl/repoperls/installed-perls/host/k93msid/v5.12.0/fc43/lib/5.12.0 .) at /tmp/loop_over_bdir-2639088-KpvPVG/Proch-N50-1.7.0-0/blib/lib/Proch/N50.pm line 10.
BEGIN failed--compilation aborted at /tmp/loop_over_bdir-2639088-KpvPVG/Proch-N50-1.7.0-0/blib/lib/Proch/N50.pm line 10.
Compilation failed in require at t/30_Windows.t line 3.
BEGIN failed--compilation aborted at t/30_Windows.t line 3.
t/30_Windows.t .....................
Dubious, test returned 2 (wstat 512, 0x200)
No subtests run
Can't locate FASTX/Reader.pm in @INC (@INC contains: /tmp/loop_over_bdir-2639088-KpvPVG/Proch-N50-1.7.0-0/bin/../lib /tmp/loop_over_bdir-2639088-KpvPVG/Proch-N50-1.7.0-0/blib/lib /tmp/loop_over_bdir-2639088-KpvPVG/Proch-N50-1.7.0-0/blib/arch /home/sand/src/perl/repoperls/installed-perls/host/k93msid/v5.12.0/fc43/lib/site_perl/5.12.0/x86_64-linux-ld /home/sand/src/perl/repoperls/installed-perls/host/k93msid/v5.12.0/fc43/lib/site_perl/5.12.0 /home/sand/src/perl/repoperls/installed-perls/host/k93msid/v5.12.0/fc43/lib/5.12.0/x86_64-linux-ld /home/sand/src/perl/repoperls/installed-perls/host/k93msid/v5.12.0/fc43/lib/5.12.0 .) at /tmp/loop_over_bdir-2639088-KpvPVG/Proch-N50-1.7.0-0/bin/../lib/Proch/N50.pm line 10.
BEGIN failed--compilation aborted at /tmp/loop_over_bdir-2639088-KpvPVG/Proch-N50-1.7.0-0/bin/../lib/Proch/N50.pm line 10.
Compilation failed in require at /tmp/loop_over_bdir-2639088-KpvPVG/Proch-N50-1.7.0-0/t/../bin/n50 line 18.
BEGIN failed--compilation aborted at /tmp/loop_over_bdir-2639088-KpvPVG/Proch-N50-1.7.0-0/t/../bin/n50 line 18.
# N50 cmd: </home/sand/src/perl/repoperls/installed-perls/host/k93msid/v5.12.0/fc43/bin/perl "/tmp/loop_over_bdir-2639088-KpvPVG/Proch-N50-1.7.0-0/t/../bin/n50" "/tmp/loop_over_bdir-2639088-KpvPVG/Proch-N50-1.7.0-0/t/../data/small_test.fa">
# N50 output: <>
t/49-prebins.t ..................... ok
n50 /home/sand/src/perl/repoperls/installed-perls/host/k93msid/v5.12.0/fc43/bin/perl /tmp/loop_over_bdir-2639088-KpvPVG/Proch-N50-1.7.0-0/t/../bin/n50 --version
-------------------------
'/home/sand/src/perl/repoperls/installed-perls/host/k93msid/v5.12.0/fc43/bin/perl /tmp/loop_over_bdir-2639088-KpvPVG/Proch-N50-1.7.0-0/t/../bin/n50 --version' exited with value 2
-------------------------
STDOUT=[0m
STDERR=Can't locate FASTX/Reader.pm in @INC (@INC contains: /tmp/loop_over_bdir-2639088-KpvPVG/Proch-N50-1.7.0-0/bin/../lib /tmp/loop_over_bdir-2639088-KpvPVG/Proch-N50-1.7.0-0/blib/lib /tmp/loop_over_bdir-2639088-KpvPVG/Proch-N50-1.7.0-0/blib/arch /home/sand/src/perl/repoperls/installed-perls/host/k93msid/v5.12.0/fc43/lib/site_perl/5.12.0/x86_64-linux-ld /home/sand/src/perl/repoperls/installed-perls/host/k93msid/v5.12.0/fc43/lib/site_perl/5.12.0 /home/sand/src/perl/repoperls/installed-perls/host/k93msid/v5.12.0/fc43/lib/5.12.0/x86_64-linux-ld /home/sand/src/perl/repoperls/installed-perls/host/k93msid/v5.12.0/fc43/lib/5.12.0 .) at /tmp/loop_over_bdir-2639088-KpvPVG/Proch-N50-1.7.0-0/bin/../lib/Proch/N50.pm line 10.
BEGIN failed--compilation aborted at /tmp/loop_over_bdir-2639088-KpvPVG/Proch-N50-1.7.0-0/bin/../lib/Proch/N50.pm line 10.
Compilation failed in require at /tmp/loop_over_bdir-2639088-KpvPVG/Proch-N50-1.7.0-0/t/../bin/n50 line 18.
BEGIN failed--compilation aborted at /tmp/loop_over_bdir-2639088-KpvPVG/Proch-N50-1.7.0-0/t/../bin/n50 line 18.[0m
TEST=(1)[0m
t/50-n50bin.t ...................... ok
t/author-50-helps.t ................ skipped: these tests are for release candidate testing
t/author-50-n50bin.t ............... skipped: these tests are for release candidate testing
t/author-50-version.t .............. skipped: these tests are for release candidate testing
t/author-51-other-bins.t ........... skipped: these tests are for release candidate testing
t/author-52-cat.t .................. skipped: these tests are for release candidate testing
t/author-52-grep.t ................. skipped: these tests are for release candidate testing
t/author-53-count.t ................ skipped: these tests are for release candidate testing
t/author-54-extract.t .............. skipped: these tests are for release candidate testing
t/author-55-uniq.t ................. skipped: these tests are for release candidate testing
t/author-99_posse.t ................ skipped: these tests are for release candidate testing
t/release-00-pod.t ................. skipped: these tests are for release candidate testing
t/release-01-pod-coverage.t ........ skipped: these tests are for release candidate testing
t/release-03-minimum-standards.t ... skipped: these tests are for release candidate testing
t/release-04-check-cpan-version.t .. skipped: these tests are for release candidate testing
t/release-05-changes-ver.t ......... skipped: these tests are for release candidate testing
t/release-05-changes.t ............. skipped: these tests are for release candidate testing
t/release-06-fastx-reader.t ........ skipped: these tests are for release candidate testing
t/release-19_exec.t ................ skipped: these tests are for release candidate testing
t/release-20_custom.t .............. skipped: these tests are for release candidate testing
t/release-20_stdin.t ............... skipped: these tests are for release candidate testing
t/release-21_bin.t ................. skipped: these tests are for release candidate testing
t/release-22_csv.t ................. skipped: these tests are for release candidate testing
Test Summary Report
-------------------
t/10-Requires_FASTX-reader-seq.t (Wstat: 256 (exited 1) Tests: 1 Failed: 1)
Failed test: 1
Non-zero exit status: 1
t/10_Load_Modules.t (Wstat: 512 (exited 2) Tests: 2 Failed: 2)
Failed tests: 1-2
Non-zero exit status: 2
t/10_Requires_FASTX-reader.t (Wstat: 256 (exited 1) Tests: 1 Failed: 1)
Failed test: 1
Non-zero exit status: 1
t/11_calculateN50.t (Wstat: 512 (exited 2) Tests: 0 Failed: 0)
Non-zero exit status: 2
Parse errors: No plan found in TAP output
t/11_seqfu.t (Wstat: 65280 (exited 255) Tests: 0 Failed: 0)
Non-zero exit status: 255
Parse errors: No plan found in TAP output
t/11_seqfu_ext.t (Wstat: 1280 (exited 5) Tests: 6 Failed: 5)
Failed tests: 1-5
Non-zero exit status: 5
t/12_new_stats.t (Wstat: 512 (exited 2) Tests: 0 Failed: 0)
Non-zero exit status: 2
Parse errors: No plan found in TAP output
t/12_stats.t (Wstat: 512 (exited 2) Tests: 0 Failed: 0)
Non-zero exit status: 2
Parse errors: No plan found in TAP output
t/13_json.t (Wstat: 512 (exited 2) Tests: 0 Failed: 0)
Non-zero exit status: 2
Parse errors: No plan found in TAP output
t/14_bad_file.t (Wstat: 512 (exited 2) Tests: 0 Failed: 0)
Non-zero exit status: 2
Parse errors: No plan found in TAP output
t/15_bad_json.t (Wstat: 512 (exited 2) Tests: 0 Failed: 0)
Non-zero exit status: 2
Parse errors: No plan found in TAP output
t/30_Windows.t (Wstat: 512 (exited 2) Tests: 0 Failed: 0)
Non-zero exit status: 2
Parse errors: No plan found in TAP output
Files=37, Tests=16, 1 wallclock secs ( 0.07 usr 0.07 sys + 0.61 cusr 0.22 csys = 0.97 CPU)
Result: FAIL
Failed 12/37 test programs. 9/16 subtests failed.
make: *** [Makefile:985: test_dynamic] Error 255
------------------------------
PREREQUISITES
------------------------------
Prerequisite modules loaded:
requires:
Module Need Have
------------------- ------ --------
! FASTX::Reader v1.8.0 n/a
Getopt::Long 2.39 2.58
JSON::PP 2.27 4.16
perl 5.012 5.012000
PerlIO::encoding 0 0.12
Pod::Usage 1.61 2.03
Text::ASCIITable 0 0.22
build_requires:
Module Need Have
------------------- ------ --------
ExtUtils::MakeMaker 0 7.70
configure_requires:
Module Need Have
------------------- ------ --------
ExtUtils::MakeMaker 0 7.70
------------------------------
ENVIRONMENT AND OTHER CONTEXT
------------------------------
Environment variables:
AUTOMATED_TESTING = 1
LANG = en_US.UTF-8
LANGUAGE = en_US:en
PATH = /home/sand/bin:/usr/local/bin:/usr/bin:/bin:/usr/games:/usr/local/perl/bin:/usr/X11/bin:/sbin:/usr/sbin
PERL5LIB =
PERL5OPT =
PERL5_CPANPLUS_IS_RUNNING = 741972
PERL5_CPAN_IS_RUNNING = 741972
PERL_CANARY_STABILITY_NOPROMPT = 1
PERL_MM_USE_DEFAULT = 1
PERL_USE_UNSAFE_INC = 1
SHELL = /usr/bin/zsh
TERM = screen
Perl special variables (and OS-specific diagnostics, for MSWin32):
$^X = /home/sand/src/perl/repoperls/installed-perls/host/k93msid/v5.12.0/fc43/bin/perl
$UID/$EUID = 1005 / 1005
$GID = 1005 1005
$EGID = 1005 1005
Perl module toolchain versions installed:
Module Have
------------------- --------
CPAN 2.38
CPAN::Meta 2.150010
Cwd 3.75
ExtUtils::CBuilder 0.280236
ExtUtils::Command 7.70
ExtUtils::Install 2.22
ExtUtils::MakeMaker 7.70
ExtUtils::Manifest 1.70
ExtUtils::ParseXS 3.51
File::Spec 3.75
JSON 4.10
JSON::PP 4.16
Module::Build 0.4234
Module::Signature 0.88
Parse::CPAN::Meta 2.150010
Test2 1.302207
Test::Harness 3.49_02
Test::More 1.302207
YAML 1.30
YAML::Syck 1.34
version 0.9930
--
Summary of my perl5 (revision 5 version 12 subversion 0) configuration:
Derived from: 6d52c880307229a35c23215c596700e716bd7c32
Platform:
osname=linux, osvers=6.1.0-7-amd64, archname=x86_64-linux-ld
uname='linux k93msid 6.1.0-7-amd64 #1 smp preempt_dynamic debian 6.1.20-1 (2023-03-19) x86_64 gnulinux '
config_args='-Dprefix=/home/sand/src/perl/repoperls/installed-perls/host/k93msid/v5.12.0/fc43 -Dmyhostname=k93msid -Dinstallusrbinperl=n -Uversiononly -Dusedevel -des -Ui_db -Dlibswanted=cl pthread socket inet nsl gdbm dbm malloc dl ld sun m crypt sec util c cposix posix ucb BSD gdbm_compat -Uuseithreads -Duselongdouble -DEBUGGING=both'
hint=recommended, useposix=true, d_sigaction=define
useithreads=undef, usemultiplicity=undef
useperlio=define, d_sfio=undef, uselargefiles=define, usesocks=undef
use64bitint=define, use64bitall=define, uselongdouble=define
usemymalloc=n, bincompat5005=undef
Compiler:
cc='cc', ccflags ='-fwrapv -DDEBUGGING -fno-strict-aliasing -pipe -fstack-protector -I/usr/local/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64',
optimize='-O2 -g',
cppflags='-fwrapv -DDEBUGGING -fno-strict-aliasing -pipe -fstack-protector -I/usr/local/include'
ccversion='', gccversion='12.2.0', gccosandvers=''
intsize=4, longsize=8, ptrsize=8, doublesize=8, byteorder=12345678
d_longlong=define, longlongsize=8, d_longdbl=define, longdblsize=16
ivtype='long', ivsize=8, nvtype='long double', nvsize=16, Off_t='off_t', lseeksize=8
alignbytes=16, prototype=define
Linker and Libraries:
ld='cc', ldflags =' -fstack-protector -L/usr/local/lib'
libpth=/usr/local/lib /lib/x86_64-linux-gnu /lib/../lib /usr/lib/x86_64-linux-gnu /usr/lib/../lib /lib /usr/lib /lib64 /usr/lib64
libs=-lpthread -lnsl -ldl -lm -lcrypt -lutil -lc
perllibs=-lpthread -lnsl -ldl -lm -lcrypt -lutil -lc
libc=/lib/x86_64-linux-gnu/libc.so.6, so=so, useshrplib=false, libperl=libperl.a
gnulibc_version='2.36'
Dynamic Linking:
dlsrc=dl_dlopen.xs, dlext=so, d_dlsymun=undef, ccdlflags='-Wl,-E'
cccdlflags='-fPIC', lddlflags='-shared -O2 -g -L/usr/local/lib -fstack-protector'
Characteristics of this binary (from libperl):
Compile-time options: DEBUGGING PERL_DONT_CREATE_GVSV PERL_MALLOC_WRAP
PERL_USE_DEVEL USE_64_BIT_ALL USE_64_BIT_INT
USE_LARGE_FILES USE_LONG_DOUBLE USE_PERLIO
USE_PERL_ATOF
Locally applied patches:
uncommitted-changes
Built under linux
Compiled at Sep 30 2023 06:21:04
%ENV:
PERL5LIB=""
PERL5OPT=""
PERL5_CPANPLUS_IS_RUNNING="741972"
PERL5_CPAN_IS_RUNNING="741972"
PERL_CANARY_STABILITY_NOPROMPT="1"
PERL_MM_USE_DEFAULT="1"
PERL_USE_UNSAFE_INC="1"
@INC:
/home/sand/src/perl/repoperls/installed-perls/host/k93msid/v5.12.0/fc43/lib/site_perl/5.12.0/x86_64-linux-ld
/home/sand/src/perl/repoperls/installed-perls/host/k93msid/v5.12.0/fc43/lib/site_perl/5.12.0
/home/sand/src/perl/repoperls/installed-perls/host/k93msid/v5.12.0/fc43/lib/5.12.0/x86_64-linux-ld
/home/sand/src/perl/repoperls/installed-perls/host/k93msid/v5.12.0/fc43/lib/5.12.0
.