Bio-FastParsers v0.180470 Perl 5 v5.26.1 x86_64-haiku

Status
Pass
From
Serguei Trouchelle (STRO)
Dist
Bio-FastParsers v0.180470
Platform
Perl 5 v5.26.1 x86_64-haiku
Date
2018-08-29 17:28:32
ID
f3d6694e-abb0-11e8-8862-f0927cb76b7a
This distribution has been tested as part of the CPAN Testers
project, supporting the Perl programming language.  See
http://wiki.cpantesters.org/ for more information or email
questions to cpan-testers-discuss@perl.org


--
Dear Denis BAURAIN,

This is a computer-generated report for Bio-FastParsers-0.180470
on perl 5.26.1, created by CPAN-Reporter-1.2018.

Thank you for uploading your work to CPAN.  Congratulations!
All tests were successful.

Sections of this report:

    * Tester comments
    * Program output
    * Prerequisites
    * Environment and other context

------------------------------
TESTER COMMENTS
------------------------------

Additional comments from tester:

this report is from an automated smoke testing program
and was not reviewed by a human for accuracy

------------------------------
PROGRAM OUTPUT
------------------------------

Output from '/bin/make test':

"/packages/perl-5.26.1-2/.self/bin/perl" "-MExtUtils::Command::MM" "-MTest::Harness" "-e" "undef *Test::Harness::Switches; test_harness(0, 'blib/lib', 'blib/arch')" t/*.t
t/author-critic.t ....... skipped: these tests are for testing by the author
t/author-pod-syntax.t ... skipped: these tests are for testing by the author
t/author-portability.t .. skipped: these tests are for testing by the author
t/blast_table.t ......... ok
Warning: 'test/empty.xml' unexpectedly empty; returning no BlastOutput! at reader Bio::FastParsers::Blast::Xml::blast_output (defined at /boot/home/.cpan/build/Bio-FastParsers-0.180470-0/blib/lib/Bio/FastParsers/Blast/Xml.pm line 20) line 8.
t/blast_xml.t ........... ok
t/clusterable.t ......... ok
t/hmmer_dom_table.t ..... ok
t/hmmer_model.t ......... ok
t/hmmer_std.t ........... ok
t/hmmer_table.t ......... ok
All tests successful.
Files=10, Tests=844,  9 wallclock secs ( 0.10 usr  0.04 sys +  6.61 cusr  1.73 csys =  8.48 CPU)
Result: PASS

------------------------------
PREREQUISITES
------------------------------

Prerequisite modules loaded:

requires:

    Module                       Need  Have    
    ---------------------------- ----- --------
    aliased                      0     0.34    
    autodie                      0     2.29    
    Carp                         0     1.42    
    Const::Fast                  0     0.014   
    Exporter::Easy               0     0.18    
    feature                      0     1.47    
    List::AllUtils               0     0.14    
    Moose                        0     2.2011  
    Moose::Role                  0     2.2011  
    Moose::Util::TypeConstraints 0     2.2011  
    namespace::autoclean         0     0.28    
    Path::Class                  0     0.37    
    perl                         5.010 5.026001
    Smart::Comments              0     1.06    
    Sort::Naturally              0     1.03    
    strict                       0     1.11    
    Test::Most                   0     0.35    
    Tie::IxHash                  0     1.23    
    Try::Tiny                    0     0.30    
    warnings                     0     1.37    
    XML::Bare                    0.53  0.53    

build_requires:

    Module                       Need  Have    
    ---------------------------- ----- --------
    ExtUtils::MakeMaker          0     7.35_06 
    Test::Most                   0     0.35    

configure_requires:

    Module                       Need  Have    
    ---------------------------- ----- --------
    ExtUtils::MakeMaker          0     7.35_06 
    perl                         5.010 5.026001


------------------------------
ENVIRONMENT AND OTHER CONTEXT
------------------------------

Environment variables:

    AUTOMATED_TESTING = 1
    LC_COLLATE = en.UTF-8
    LC_CTYPE = en.UTF-8
    LC_MESSAGES = en.UTF-8
    LC_MONETARY = en.UTF-8
    LC_NUMERIC = en.UTF-8
    LC_TIME = en.UTF-8
    LC_TYPE = en_US.UTF-8
    PATH = /boot/home/perl5/bin:.:/boot/home/config/non-packaged/bin:/boot/home/config/bin:/boot/system/non-packaged/bin:/bin:/boot/system/apps:/boot/system/preferences
    PERL5LIB = /boot/home/perl5/lib/perl5
    PERL5OPT = 
    PERL5_CPANPLUS_IS_RUNNING = 714213
    PERL5_CPAN_IS_RUNNING = 714213
    PERL5_CPAN_IS_RUNNING_IN_RECURSION = 456871,714213
    PERL_CR_SMOKER_CURRENT = Bio-MUST-Core-0.181310
    PERL_EXTUTILS_AUTOINSTALL = --defaultdeps
    PERL_LOCAL_LIB_ROOT = /boot/home/perl5
    PERL_MB_OPT = --install_base "/boot/home/perl5"
    PERL_MM_OPT = INSTALL_BASE=/boot/home/perl5
    PERL_MM_USE_DEFAULT = 1
    PERL_USE_UNSAFE_INC = 1
    TERM = xterm

Perl special variables (and OS-specific diagnostics, for MSWin32):

    $^X = /packages/perl-5.26.1-2/.self/bin/perl
    $UID/$EUID = 0 / 0
    $GID = 0 101 0
    $EGID = 0 101 0

Perl module toolchain versions installed:

    Module              Have    
    ------------------- --------
    CPAN                2.18    
    CPAN::Meta          2.150010
    Cwd                 3.67    
    ExtUtils::CBuilder  0.280225
    ExtUtils::Command   7.35_06 
    ExtUtils::Install   2.06    
    ExtUtils::MakeMaker 7.35_06 
    ExtUtils::Manifest  1.71    
    ExtUtils::ParseXS   3.34    
    File::Spec          3.67    
    JSON                2.97001 
    JSON::PP            2.97001 
    Module::Build       0.4224  
    Module::Signature   n/a     
    Parse::CPAN::Meta   2.150010
    Test::Harness       3.38    
    Test::More          1.302138
    YAML                1.26    
    YAML::Syck          1.30    
    version             0.9917  


--

Summary of my perl5 (revision 5 version 26 subversion 1) configuration:
  Derived from: 
  Platform:
    osname=haiku
    osvers=1
    archname=x86_64-haiku
    uname='haiku shredder 1 hrev51655 dec 4 2017 12:44:17 x86_64 x86_64 haiku '
    config_args='-Dprefix=/packages/perl-5.26.1-2/.self -Dprivlib=/packages/perl-5.26.1-2/.self/lib/perl5/5.26.1 -Dsiteprefix=/packages/perl-5.26.1-2/.self/non-packaged -Dsitelib=/packages/perl-5.26.1-2/.self/non-packaged/lib/perl5/site_perl/5.26 -Dvendorprefix=/packages/perl-5.26.1-2/.self -Dvendorlib=/packages/perl-5.26.1-2/.self/lib/perl5/vendor_perl/5.26 -Dcf_email=zooey@hirschkaefer.de -Uusenm -Duseshrplib -Uusemymalloc -Dlibpth=/boot/home/config/develop/lib /boot/system/develop/lib -Dusrinc=/boot/system/develop/headers/posix -Dlocinc=/boot/home/config/develop/headers /boot/system/develop/headers -Dlibc='/boot/system/lib/libroot.so' -Dlibs=-lnetwork -Dcc=gcc -Dld=gcc -Ud_link -Ddont_use_nlink -Ud_syserrlst -Dldlibpthname=LIBRARY_PATH -Dstartperl=#! perl -Dccdlflags=-Wl,-fno-stack-protector,-rpath=/packages/perl-5.26.1-2/.self/lib/perl5/5.26.1/x86_64-haiku/CORE -Dusesitecustomize -de'
    hint=recommended
    useposix=true
    d_sigaction=define
    useithreads=undef
    usemultiplicity=undef
    use64bitint=define
    use64bitall=define
    uselongdouble=undef
    usemymalloc=n
    default_inc_excludes_dot=define
    bincompat5005=undef
  Compiler:
    cc='gcc'
    ccflags ='-fwrapv -fno-strict-aliasing -pipe -D_FORTIFY_SOURCE=2'
    optimize='-O'
    cppflags='-fwrapv -fno-strict-aliasing -pipe'
    ccversion=''
    gccversion='5.4.0'
    gccosandvers=''
    intsize=4
    longsize=8
    ptrsize=8
    doublesize=8
    byteorder=12345678
    doublekind=3
    d_longlong=define
    longlongsize=8
    d_longdbl=define
    longdblsize=16
    longdblkind=3
    ivtype='long'
    ivsize=8
    nvtype='double'
    nvsize=8
    Off_t='off_t'
    lseeksize=8
    alignbytes=8
    prototype=define
  Linker and Libraries:
    ld='gcc'
    ldflags =''
    libpth=/boot/home/config/develop/lib /boot/system/develop/lib /boot/system/develop/tools/bin/../lib/gcc/x86_64-unknown-haiku/5.4.0/include-fixed
    libs=-lnetwork
    perllibs=-lnetwork
    libc=/boot/system/lib/libroot.so
    so=so
    useshrplib=true
    libperl=libperl.so
    gnulibc_version=''
  Dynamic Linking:
    dlsrc=dl_dlopen.xs
    dlext=so
    d_dlsymun=undef
    ccdlflags='-Wl,-fno-stack-protector,-rpath=/packages/perl-5.26.1-2/.self/lib/perl5/5.26.1/x86_64-haiku/CORE -Wl,-rpath,/packages/perl-5.26.1-2/.self/lib/perl5/5.26.1/x86_64-haiku/CORE'
    cccdlflags='-fpic'
    lddlflags='-shared'


Characteristics of this binary (from libperl): 
  Compile-time options:
    HAS_TIMES
    PERLIO_LAYERS
    PERL_COPY_ON_WRITE
    PERL_DONT_CREATE_GVSV
    PERL_OP_PARENT
    PERL_PRESERVE_IVUV
    USE_64_BIT_ALL
    USE_64_BIT_INT
    USE_LARGE_FILES
    USE_LOCALE
    USE_LOCALE_COLLATE
    USE_LOCALE_CTYPE
    USE_LOCALE_NUMERIC
    USE_LOCALE_TIME
    USE_PERLIO
    USE_PERL_ATOF
    USE_SITECUSTOMIZE
  Locally applied patches:
    uncommitted-changes
  Built under haiku
  Compiled at Mar 14 2018 20:50:46
  %ENV:
    PERL5LIB="/boot/home/perl5/lib/perl5"
    PERL5OPT=""
    PERL5_CPANPLUS_IS_RUNNING="714213"
    PERL5_CPAN_IS_RUNNING="714213"
    PERL5_CPAN_IS_RUNNING_IN_RECURSION="456871,714213"
    PERL_CR_SMOKER_CURRENT="Bio-MUST-Core-0.181310"
    PERL_EXTUTILS_AUTOINSTALL="--defaultdeps"
    PERL_LOCAL_LIB_ROOT="/boot/home/perl5"
    PERL_MB_OPT="--install_base "/boot/home/perl5""
    PERL_MM_OPT="INSTALL_BASE=/boot/home/perl5"
    PERL_MM_USE_DEFAULT="1"
    PERL_USE_UNSAFE_INC="1"
  @INC:
    /boot/home/perl5/lib/perl5/5.26.1/x86_64-haiku
    /boot/home/perl5/lib/perl5/5.26.1
    /boot/home/perl5/lib/perl5/x86_64-haiku
    /boot/home/perl5/lib/perl5
    /packages/perl-5.26.1-2/.self/non-packaged/lib/perl5/site_perl/5.26/x86_64-haiku
    /packages/perl-5.26.1-2/.self/non-packaged/lib/perl5/site_perl/5.26
    /packages/perl-5.26.1-2/.self/lib/perl5/vendor_perl/5.26/x86_64-haiku
    /packages/perl-5.26.1-2/.self/lib/perl5/vendor_perl/5.26
    /packages/perl-5.26.1-2/.self/lib/perl5/5.26.1/x86_64-haiku
    /packages/perl-5.26.1-2/.self/lib/perl5/5.26.1
    .