Bio-SDRS v0.11 Perl 5 v5.27.5 x86_64-linux-thread-multi-ld
- Status
- Fail
- From
- Andreas J. König (ANDK)
- Dist
-
Bio-SDRS v0.11
- Platform
- Perl 5 v5.27.5 x86_64-linux-thread-multi-ld
- Date
- 2017-09-27 02:52:14
- ID
- ddb9aad0-a32e-11e7-a985-52c66a005959
This distribution has been tested as part of the CPAN Testers
project, supporting the Perl programming language. See
http://wiki.cpantesters.org/ for more information or email
questions to cpan-testers-discuss@perl.org
--
Dear Robert E Bruccoleri,
This is a computer-generated report for Bio-SDRS-0.11
on perl 5.27.5, created by CPAN-Reporter-1.2018.
Thank you for uploading your work to CPAN. However, there was a problem
testing your distribution.
If you think this report is invalid, please consult the CPAN Testers Wiki
for suggestions on how to avoid getting FAIL reports for missing library
or binary dependencies, unsupported operating systems, and so on:
http://wiki.cpantesters.org/wiki/CPANAuthorNotes
Sections of this report:
* Tester comments
* Program output
* Prerequisites
* Environment and other context
------------------------------
TESTER COMMENTS
------------------------------
Additional comments from tester:
this report is from an automated smoke testing program
and was not reviewed by a human for accuracy
------------------------------
PROGRAM OUTPUT
------------------------------
Output from '/usr/bin/make test':
PERL_DL_NONLAZY=1 "/tmp/basesmoker-reloperl-REtv/bin/perl" "-MExtUtils::Command::MM" "-MTest::Harness" "-e" "undef *Test::Harness::Switches; test_harness(0, 'blib/lib', 'blib/arch')" t/*.t
# Failed test 't/sdrs.1.1.05.20.EC50.out.srt: line 5 match: line1 = C3-BMY-026015 23.018 0.787 63.9362 4788.26 568.263 0.00053063 4724.33 1 1.639 6.883 -6.000 4.19951
# line2 = C3-BMY-026015 23.018 0.787 63.9362 4788.26 548.263 0.00053063 4724.33 1 1.639 6.883 -6.000 4.19951'
# at t/Bio-SDRS.t line 148.
# Failed test 't/sdrs.2.1.05.20.EC50.out.srt: line 1 match: line1 = BAD 10602795409622567019491875811083539065347937843107301969542837862831913205163255308030475384757007358048951635658233904807806951426833175089277680799407649216080849664104552313465481814939983487082085217991097863230533355698421909497145271417135460598104042740495924604834467050946081948015654067368605080708971621253120.000 10602795409622567019491875811083539065347937843107301969542837862831913205163255308030475384757007358048951635658233904807806951426833175089277680799407649216080849664104552313465481814939983487082085217991097863230533355698421909497145271417135460598104042740495924604834467050946081948015654067368605080708971621253120.000 0.4 25008.3 16008.3 0 25007.9 1 0.000 0.000 0.000 -99999
# line2 = BAD 1356108009095785748456601438652873378997711514252510256095272573108794931469999720940713669626305793745777442441862543383584348065638270140904110833318541734107590336265963356531992136396431075888583196389564113648653497164072629754050707174696232850905440835483999357709704818814180488213970961976518508544.000 1356108009095785748456601438652873378997711514252510256095272573108794931469999720940713669626305793745777442441862543383584348065638270140904110833318541734107590336265963356531992136396431075888583196389564113648653497164072629754050707174696232850905440835483999357709704818814180488213970961976518508544.000 0.4 25008.3 21828.3 0 25007.9 1 0.000 0.000 0.000 -99999'
# at t/Bio-SDRS.t line 148.
# Failed test 't/sdrs.2.1.05.20.out.srt: line 1 match: line1 = BAD 0.40000 10602795409622567019491875811083539065347937843107301969542837862831913205163255308030475384757007358048951635658233904807806951426833175089277680799407649216080849664104552313465481814939983487082085217991097863230533355698421909497145271417135460598104042740495924604834467050946081948015654067368605080708971621253120.000 0.000 0.000 0.000
# line2 = BAD 0.40000 1356108009095785748456601438652873378997711514252510256095272573108794931469999720940713669626305793745777442441862543383584348065638270140904110833318541734107590336265963356531992136396431075888583196389564113648653497164072629754050707174696232850905440835483999357709704818814180488213970961976518508544.000 0.000 0.000 0.000'
# at t/Bio-SDRS.t line 148.
# Looks like you failed 3 tests of 44002.
t/Bio-SDRS.t ..
Dubious, test returned 3 (wstat 768, 0x300)
Failed 3/44002 subtests
Test Summary Report
-------------------
t/Bio-SDRS.t (Wstat: 768 Tests: 44002 Failed: 3)
Failed tests: 18, 43998, 44002
Non-zero exit status: 3
Files=1, Tests=44002, 57 wallclock secs ( 2.37 usr 0.09 sys + 159.62 cusr 1.59 csys = 163.67 CPU)
Result: FAIL
Failed 1/1 test programs. 3/44002 subtests failed.
Makefile:870: recipe for target 'test_dynamic' failed
make: *** [test_dynamic] Error 3
------------------------------
PREREQUISITES
------------------------------
Prerequisite modules loaded:
requires:
Module Need Have
------------------------- ---- ----
Inline 0.45 0.80
Inline::C 0 0.78
Math::NumberCruncher 5.00 5.00
Statistics::Distributions 1.02 1.02
build_requires:
Module Need Have
------------------------- ---- ----
ExtUtils::MakeMaker 0 7.30
------------------------------
ENVIRONMENT AND OTHER CONTEXT
------------------------------
Environment variables:
AUTOMATED_TESTING = 1
LANG = en_US.UTF-8
PATH = /home/sand/bin:/usr/local/bin:/usr/bin:/bin:/usr/games:/usr/local/perl/bin:/usr/X11/bin:/sbin:/usr/sbin
PERL5LIB =
PERL5OPT =
PERL5_CPANPLUS_IS_RUNNING = 15510
PERL5_CPAN_IS_RUNNING = 15510
PERL_CANARY_STABILITY_NOPROMPT = 1
PERL_MM_USE_DEFAULT = 1
PERL_USE_UNSAFE_INC = 1
SHELL = /usr/bin/zsh
TERM = screen
Perl special variables (and OS-specific diagnostics, for MSWin32):
$^X = /tmp/basesmoker-reloperl-REtv/bin/perl
$UID/$EUID = 1005 / 1005
$GID = 1005 1005
$EGID = 1005 1005
Perl module toolchain versions installed:
Module Have
------------------- --------
CPAN 2.18
CPAN::Meta 2.150010
Cwd 3.68
ExtUtils::CBuilder 0.280228
ExtUtils::Command 7.30
ExtUtils::Install 2.14
ExtUtils::MakeMaker 7.30
ExtUtils::Manifest 1.70
ExtUtils::ParseXS 3.35
File::Spec 3.68
JSON 2.94
JSON::PP 2.94
Module::Build 0.4224
Module::Signature 0.81
Parse::CPAN::Meta 2.150010
Test::Harness 3.39
Test::More 1.302096
YAML 1.23
YAML::Syck 1.30
version 0.9918
--
Summary of my perl5 (revision 5 version 27 subversion 5) configuration:
Commit id: dc416353138cab69d334678ddd9a81b590030ef2
Platform:
osname=linux
osvers=4.9.0-2-amd64
archname=x86_64-linux-thread-multi-ld
uname='linux k93msid 4.9.0-2-amd64 #1 smp debian 4.9.18-1 (2017-03-30) x86_64 gnulinux '
config_args='-Dprefix=/home/sand/src/perl/repoperls/installed-perls/host/k93msid/v5.27.4-29-gdc41635313/8854 -Dmyhostname=k93msid -Dinstallusrbinperl=n -Uversiononly -Dusedevel -des -Ui_db -Dlibswanted=cl pthread socket inet nsl gdbm dbm malloc dl ld sun m crypt sec util c cposix posix ucb BSD gdbm_compat -Duseithreads -Duselongdouble -DEBUGGING=-g'
hint=recommended
useposix=true
d_sigaction=define
useithreads=define
usemultiplicity=define
use64bitint=define
use64bitall=define
uselongdouble=define
usemymalloc=n
default_inc_excludes_dot=define
bincompat5005=undef
Compiler:
cc='cc'
ccflags ='-D_REENTRANT -D_GNU_SOURCE -fwrapv -fno-strict-aliasing -pipe -fstack-protector-strong -I/usr/local/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2'
optimize='-O2 -g'
cppflags='-D_REENTRANT -D_GNU_SOURCE -fwrapv -fno-strict-aliasing -pipe -fstack-protector-strong -I/usr/local/include'
ccversion=''
gccversion='6.3.0 20170406'
gccosandvers=''
intsize=4
longsize=8
ptrsize=8
doublesize=8
byteorder=12345678
doublekind=3
d_longlong=define
longlongsize=8
d_longdbl=define
longdblsize=16
longdblkind=3
ivtype='long'
ivsize=8
nvtype='long double'
nvsize=16
Off_t='off_t'
lseeksize=8
alignbytes=16
prototype=define
Linker and Libraries:
ld='cc'
ldflags =' -fstack-protector-strong -L/usr/local/lib'
libpth=/usr/local/lib /usr/lib/gcc/x86_64-linux-gnu/6/include-fixed /usr/include/x86_64-linux-gnu /usr/lib /lib/x86_64-linux-gnu /lib/../lib /usr/lib/x86_64-linux-gnu /usr/lib/../lib /lib
libs=-lpthread -lnsl -ldl -lm -lcrypt -lutil -lc
perllibs=-lpthread -lnsl -ldl -lm -lcrypt -lutil -lc
libc=libc-2.24.so
so=so
useshrplib=false
libperl=libperl.a
gnulibc_version='2.24'
Dynamic Linking:
dlsrc=dl_dlopen.xs
dlext=so
d_dlsymun=undef
ccdlflags='-Wl,-E'
cccdlflags='-fPIC'
lddlflags='-shared -O2 -g -L/usr/local/lib -fstack-protector-strong'
Characteristics of this binary (from libperl):
Compile-time options:
HAS_TIMES
MULTIPLICITY
PERLIO_LAYERS
PERL_COPY_ON_WRITE
PERL_DONT_CREATE_GVSV
PERL_IMPLICIT_CONTEXT
PERL_MALLOC_WRAP
PERL_OP_PARENT
PERL_PRESERVE_IVUV
PERL_USE_DEVEL
USE_64_BIT_ALL
USE_64_BIT_INT
USE_ITHREADS
USE_LARGE_FILES
USE_LOCALE
USE_LOCALE_COLLATE
USE_LOCALE_CTYPE
USE_LOCALE_NUMERIC
USE_LOCALE_TIME
USE_LONG_DOUBLE
USE_PERLIO
USE_PERL_ATOF
USE_REENTRANT_API
Built under linux
Compiled at Sep 26 2017 13:41:59
%ENV:
PERL5LIB=""
PERL5OPT=""
PERL5_CPANPLUS_IS_RUNNING="15510"
PERL5_CPAN_IS_RUNNING="15510"
PERL_CANARY_STABILITY_NOPROMPT="1"
PERL_MM_USE_DEFAULT="1"
PERL_USE_UNSAFE_INC="1"
@INC:
/home/sand/src/perl/repoperls/installed-perls/host/k93msid/v5.27.4-29-gdc41635313/8854/lib/site_perl/5.27.5/x86_64-linux-thread-multi-ld
/home/sand/src/perl/repoperls/installed-perls/host/k93msid/v5.27.4-29-gdc41635313/8854/lib/site_perl/5.27.5
/home/sand/src/perl/repoperls/installed-perls/host/k93msid/v5.27.4-29-gdc41635313/8854/lib/5.27.5/x86_64-linux-thread-multi-ld
/home/sand/src/perl/repoperls/installed-perls/host/k93msid/v5.27.4-29-gdc41635313/8854/lib/5.27.5
.