Back
From: metabase:user:30977d10-2aae-11df-837a-5e0a49663a4f
Subject: UNKNOWN Bio-DB-HTS-2.7 v5.25.7 GNU/Linux
Date: 2017-01-06T06:45:55Z
This distribution has been tested as part of the CPAN Testers
project, supporting the Perl programming language. See
http://wiki.cpantesters.org/ for more information or email
questions to cpan-testers-discuss@perl.org
--
Dear Rishi Nag,
This is a computer-generated report for Bio-DB-HTS-2.7
on perl 5.25.7, created by CPAN-Reporter-1.2018.
Thank you for uploading your work to CPAN. However, attempting to
test your distribution gave an inconclusive result.
This could be because your distribution had an error during the make/build
stage, did not define tests, tests could not be found, because your tests were
interrupted before they finished, or because the results of the tests could not
be parsed. You may wish to consult the CPAN Testers Wiki:
http://wiki.cpantesters.org/wiki/CPANAuthorNotes
Sections of this report:
* Tester comments
* Program output
* Prerequisites
* Environment and other context
------------------------------
TESTER COMMENTS
------------------------------
Additional comments from tester:
this report is from an automated smoke testing program
and was not reviewed by a human for accuracy
------------------------------
PROGRAM OUTPUT
------------------------------
Output from '/home/stro/perl/5.25.7/bin/perl Build.PL':
This module requires htslib (http://htslib/org)
Install it if you have not done so already.
This script will attempt to locate htslib by looking for hts.h and libhts.a in:
1. --htslib command line argument
2. HTSLIB_DIR environment variable
3. --prefix command line argument (which also sets installation location)
4. Alien::HTSlib dependency resolver
5. pkg-config (extra directories can be set in PKG_CONFIG_PATH environment variable)
6. common library locations: /usr /usr/local, /usr/share, /opt/local
------------------------------
PREREQUISITES
------------------------------
Prerequisite modules loaded:
configure_requires:
Module Need Have
------------- ---- ------
Module::Build 0.42 0.4220
------------------------------
ENVIRONMENT AND OTHER CONTEXT
------------------------------
Environment variables:
AUTOMATED_TESTING = 1
LANG = en_US.UTF-8
PATH = /usr/local/bin:/usr/bin:/bin:/usr/local/games:/usr/games
PERL = /home/stro/perl/5.25.7/bin/perl
PERL5LIB =
PERL5OPT = -I/tmp/CPAN-Reporter-lib-K0fS -MDevel::Autoflush
PERL5_CPANPLUS_IS_RUNNING = 3634
PERL5_CPAN_IS_EXECUTING =
PERL5_CPAN_IS_RUNNING = 3634
PERL5_CPAN_IS_RUNNING_IN_RECURSION = 13234,3634
PERL_AUTOINSTALL = --defaultdeps
PERL_CR_SMOKER_CURRENT = Bio-DB-HTS-2.7
PERL_EXTUTILS_AUTOINSTALL = --defaultdeps
PERL_MM_USE_DEFAULT = 1
SHELL = /bin/bash
TERM = xterm
Perl special variables (and OS-specific diagnostics, for MSWin32):
$^X = /home/stro/perl/5.25.7/bin/perl
$UID/$EUID = 1000 / 1000
$GID = 1000 24 25 29 30 44 46 108 114 1000
$EGID = 1000 24 25 29 30 44 46 108 114 1000
Perl module toolchain versions installed:
Module Have
------------------- ----------
CPAN 2.14_01
CPAN::Meta 2.150010
Cwd 3.66
ExtUtils::CBuilder 0.280225
ExtUtils::Command 7.24
ExtUtils::Install 2.04
ExtUtils::MakeMaker 7.24
ExtUtils::Manifest 1.70
ExtUtils::ParseXS 3.33
File::Spec 3.66
JSON 2.90
JSON::PP 2.27400_02
Module::Build 0.4220
Module::Signature 0.81
Parse::CPAN::Meta 2.150010
Test::Harness 3.36_01
Test::More 1.302073
YAML 1.21
YAML::Syck 1.29
version 0.9917
--
Summary of my perl5 (revision 5 version 25 subversion 7) configuration:
Platform:
osname=linux
osvers=3.16.0-4-amd64
archname=x86_64-linux
uname='linux vm-debian-001 3.16.0-4-amd64 #1 smp debian 3.16.7-ckt11-1 (2015-05-24) x86_64 gnulinux '
config_args=''
hint=recommended
useposix=true
d_sigaction=define
useithreads=undef
usemultiplicity=undef
use64bitint=define
use64bitall=define
uselongdouble=undef
usemymalloc=n
bincompat5005=undef
Compiler:
cc='cc'
ccflags ='-fwrapv -fno-strict-aliasing -pipe -fstack-protector-strong -I/usr/local/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2'
optimize='-O2'
cppflags='-fwrapv -fno-strict-aliasing -pipe -fstack-protector-strong -I/usr/local/include'
ccversion=''
gccversion='4.9.2'
gccosandvers=''
intsize=4
longsize=8
ptrsize=8
doublesize=8
byteorder=12345678
doublekind=3
d_longlong=define
longlongsize=8
d_longdbl=define
longdblsize=16
longdblkind=3
ivtype='long'
ivsize=8
nvtype='double'
nvsize=8
Off_t='off_t'
lseeksize=8
alignbytes=8
prototype=define
Linker and Libraries:
ld='cc'
ldflags =' -fstack-protector-strong -L/usr/local/lib'
libpth=/usr/local/lib /usr/lib/gcc/x86_64-linux-gnu/4.9/include-fixed /usr/include/x86_64-linux-gnu /usr/lib /lib/x86_64-linux-gnu /lib/../lib /usr/lib/x86_64-linux-gnu /usr/lib/../lib /lib
libs=-lpthread -lnsl -ldl -lm -lcrypt -lutil -lc
perllibs=-lpthread -lnsl -ldl -lm -lcrypt -lutil -lc
libc=libc-2.19.so
so=so
useshrplib=false
libperl=libperl.a
gnulibc_version='2.19'
Dynamic Linking:
dlsrc=dl_dlopen.xs
dlext=so
d_dlsymun=undef
ccdlflags='-Wl,-E'
cccdlflags='-fPIC'
lddlflags='-shared -O2 -L/usr/local/lib -fstack-protector-strong'
Characteristics of this binary (from libperl):
Compile-time options:
HAS_TIMES
PERLIO_LAYERS
PERL_COPY_ON_WRITE
PERL_DONT_CREATE_GVSV
PERL_HASH_FUNC_ONE_AT_A_TIME_HARD
PERL_MALLOC_WRAP
PERL_OP_PARENT
PERL_PRESERVE_IVUV
USE_64_BIT_ALL
USE_64_BIT_INT
USE_LARGE_FILES
USE_LOCALE
USE_LOCALE_COLLATE
USE_LOCALE_CTYPE
USE_LOCALE_NUMERIC
USE_LOCALE_TIME
USE_PERLIO
USE_PERL_ATOF
Built under linux
Compiled at Nov 23 2016 11:09:29
%ENV:
PERL="/home/stro/perl/5.25.7/bin/perl"
PERL5LIB=""
PERL5OPT=""
PERL5_CPANPLUS_IS_RUNNING="3634"
PERL5_CPAN_IS_EXECUTING=""
PERL5_CPAN_IS_RUNNING="3634"
PERL5_CPAN_IS_RUNNING_IN_RECURSION="13234,3634"
PERL_AUTOINSTALL="--defaultdeps"
PERL_CR_SMOKER_CURRENT="Bio-DB-HTS-2.7"
PERL_EXTUTILS_AUTOINSTALL="--defaultdeps"
PERL_MM_USE_DEFAULT="1"
@INC:
/home/stro/perl/5.25.7/lib/site_perl/5.25.7/x86_64-linux
/home/stro/perl/5.25.7/lib/site_perl/5.25.7
/home/stro/perl/5.25.7/lib/5.25.7/x86_64-linux
/home/stro/perl/5.25.7/lib/5.25.7
.