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From: metabase:user:30f4dfbe-2aae-11df-837a-5e0a49663a4f
Subject: UNKNOWN Bio-DB-HTS-3.01 5.8.4 Dragonfly BSD
Date: 2019-04-23T15:23:39Z
This distribution has been tested as part of the CPAN Testers
project, supporting the Perl programming language. See
http://wiki.cpantesters.org/ for more information or email
questions to cpan-testers-discuss@perl.org
--
Dear Alessandro Vullo,
This is a computer-generated report for Bio-DB-HTS-3.01
on perl 5.8.4, created by CPAN-Reporter-1.2018.
Thank you for uploading your work to CPAN. However, attempting to
test your distribution gave an inconclusive result.
This could be because your distribution had an error during the make/build
stage, did not define tests, tests could not be found, because your tests were
interrupted before they finished, or because the results of the tests could not
be parsed. You may wish to consult the CPAN Testers Wiki:
http://wiki.cpantesters.org/wiki/CPANAuthorNotes
Sections of this report:
* Tester comments
* Program output
* Prerequisites
* Environment and other context
------------------------------
TESTER COMMENTS
------------------------------
Additional comments from tester:
this report is from an automated smoke testing program
and was not reviewed by a human for accuracy
------------------------------
PROGRAM OUTPUT
------------------------------
Output from '/home/njh/perl5/perlbrew/perls/perl-5.8.4/bin/perl Build.PL':
Checking prerequisites...
requires:
! Bio::SeqFeature::Lite is not installed
ERRORS/WARNINGS FOUND IN PREREQUISITES. You may wish to install the versions
of the modules indicated above before proceeding with this installation
This module requires HTSlib (http://htslib.org/)
Install it if you have not done so already.
This script will attempt to locate HTSlib by looking for htslib/hts.h
and libhts.a / libhts.so in:
1. --htslib command line argument
2. HTSLIB_DIR environment variable
3. --prefix command line argument (which also sets installation location)
4. Alien::HTSlib dependency resolver
5. pkg-config (extra directories can be set in PKG_CONFIG_PATH environment variable)
6. common library locations: /usr /usr/local, /usr/share, /opt/local
------------------------------
PREREQUISITES
------------------------------
Prerequisite modules loaded:
configure_requires:
Module Need Have
------------- ---- ------
Module::Build 0.38 0.4229
------------------------------
ENVIRONMENT AND OTHER CONTEXT
------------------------------
Environment variables:
AUTOMATED_TESTING = 1
NONINTERACTIVE_TESTING = 1
PATH = /home/njh/perl5/perlbrew/bin:/home/njh/perl5/perlbrew/perls/perl-5.8.4/bin:src/njh/smoker/bin:/bin:/sbin:/usr/bin:/usr/sbin:/usr/local/bin:/usr/local/sbin:/usr/pkg/bin:/usr/pkg/sbin
PERL = /home/njh/perl5/perlbrew/perls/perl-5.8.4/bin/perl
PERL5LIB = /home/njh/.cpan/build/Module-Build-0.4229-5/blib/arch:/home/njh/.cpan/build/Module-Build-0.4229-5/blib/lib
PERL5OPT = -I/tmp/testwrapper.220552/CPAN-Reporter-lib-fID6 -MDevel::Autoflush
PERL5_CPANPLUS_IS_RUNNING = 220566
PERL5_CPAN_IS_EXECUTING =
PERL5_CPAN_IS_RUNNING = 220566
PERLBREW_HOME = /home/njh/.perlbrew
PERLBREW_MANPATH = /home/njh/perl5/perlbrew/perls/perl-5.8.4/man
PERLBREW_PATH = /home/njh/perl5/perlbrew/bin:/home/njh/perl5/perlbrew/perls/perl-5.8.4/bin
PERLBREW_PERL = perl-5.8.4
PERLBREW_ROOT = /home/njh/perl5/perlbrew
PERLBREW_SHELLRC_VERSION = 0.86
PERLBREW_VERSION = 0.86
PERL_AUTOINSTALL = --defaultdeps
PERL_EXTUTILS_AUTOINSTALL = --defaultdeps
PERL_MM_USE_DEFAULT = 1
PERL_USE_UNSAFE_INC = 1
SHELL = /bin/sh
TMPDIR = /tmp/testwrapper.220552
Perl special variables (and OS-specific diagnostics, for MSWin32):
$^X = /home/njh/perl5/perlbrew/perls/perl-5.8.4/bin/perl
$UID/$EUID = 1001 / 1001
$GID = 1001 0 1001
$EGID = 1001 0 1001
Perl module toolchain versions installed:
Module Have
------------------- --------
CPAN 2.26
CPAN::Meta 2.143240
Cwd 3.75
ExtUtils::CBuilder 0.280230
ExtUtils::Command 7.30
ExtUtils::Install 2.06
ExtUtils::MakeMaker 7.30
ExtUtils::Manifest 1.70
ExtUtils::ParseXS 3.35
File::Spec 3.75
JSON 4.01
JSON::PP 2.97001
Module::Build 0.4229
Module::Signature n/a
Parse::CPAN::Meta 1.4414
Test::Harness 3.39
Test::More 1.302136
YAML n/a
YAML::Syck 1.31
version 0.9918
--
Summary of my perl5 (revision 5 version 8 subversion 4) configuration:
Platform:
osname=dragonfly, osvers=5.0-release, archname=x86_64-dragonfly
uname='dragonfly david.bandsman.co.uk 5.0-release dragonfly v5.0.2-release #4: sun dec 3 17:42:25 est 2017 root@www.shiningsilence.com:usrobjhomejustinrelease5_0sysx86_64_generic x86_64 '
config_args='-de -Dprefix=/home/njh/perl5/perlbrew/perls/perl-5.8.4 -Aeval:scriptdir=/home/njh/perl5/perlbrew/perls/perl-5.8.4/bin'
hint=recommended, useposix=true, d_sigaction=define
usethreads=undef use5005threads=undef useithreads=undef usemultiplicity=undef
useperlio=define d_sfio=undef uselargefiles=define usesocks=undef
use64bitint=define use64bitall=define uselongdouble=undef
usemymalloc=n, bincompat5005=undef
Compiler:
cc='cc', ccflags ='-DHAS_FPSETMASK -DHAS_FLOATINGPOINT_H -fno-strict-aliasing -I/usr/local/include',
optimize='-O',
cppflags='-DHAS_FPSETMASK -DHAS_FLOATINGPOINT_H -fno-strict-aliasing -I/usr/local/include'
ccversion='', gccversion='5.4.1 [DragonFly] Release/2016-08-27', gccosandvers=''
intsize=4, longsize=8, ptrsize=8, doublesize=8, byteorder=12345678
d_longlong=define, longlongsize=8, d_longdbl=define, longdblsize=16
ivtype='long', ivsize=8, nvtype='double', nvsize=8, Off_t='off_t', lseeksize=8
alignbytes=8, prototype=define
Linker and Libraries:
ld='cc', ldflags ='-Wl,-E -L/usr/local/lib'
libpth=/usr/lib /usr/local/lib
libs=-ldl -lm -lcrypt -lutil -lc
perllibs=-ldl -lm -lcrypt -lutil -lc
libc=, so=so, useshrplib=false, libperl=libperl.a
gnulibc_version=''
Dynamic Linking:
dlsrc=dl_dlopen.xs, dlext=so, d_dlsymun=undef, ccdlflags=' '
cccdlflags='-DPIC -fPIC', lddlflags='-shared -L/usr/local/lib'
Characteristics of this binary (from libperl):
Compile-time options: USE_64_BIT_INT USE_64_BIT_ALL USE_LARGE_FILES
Locally applied patches:
Devel::PatchPerl 1.48
Built under dragonfly
Compiled at Jan 29 2018 02:55:05
%ENV:
PERL="/home/njh/perl5/perlbrew/perls/perl-5.8.4/bin/perl"
PERL5LIB="/home/njh/.cpan/build/Module-Build-0.4229-5/blib/arch:/home/njh/.cpan/build/Module-Build-0.4229-5/blib/lib"
PERL5OPT=""
PERL5_CPANPLUS_IS_RUNNING="220566"
PERL5_CPAN_IS_EXECUTING=""
PERL5_CPAN_IS_RUNNING="220566"
PERLBREW_HOME="/home/njh/.perlbrew"
PERLBREW_MANPATH="/home/njh/perl5/perlbrew/perls/perl-5.8.4/man"
PERLBREW_PATH="/home/njh/perl5/perlbrew/bin:/home/njh/perl5/perlbrew/perls/perl-5.8.4/bin"
PERLBREW_PERL="perl-5.8.4"
PERLBREW_ROOT="/home/njh/perl5/perlbrew"
PERLBREW_SHELLRC_VERSION="0.86"
PERLBREW_VERSION="0.86"
PERL_AUTOINSTALL="--defaultdeps"
PERL_EXTUTILS_AUTOINSTALL="--defaultdeps"
PERL_MM_USE_DEFAULT="1"
PERL_USE_UNSAFE_INC="1"
@INC:
/home/njh/.cpan/build/Module-Build-0.4229-5/blib/arch
/home/njh/.cpan/build/Module-Build-0.4229-5/blib/lib
/home/njh/perl5/perlbrew/perls/perl-5.8.4/lib/5.8.4/x86_64-dragonfly
/home/njh/perl5/perlbrew/perls/perl-5.8.4/lib/5.8.4
/home/njh/perl5/perlbrew/perls/perl-5.8.4/lib/site_perl/5.8.4/x86_64-dragonfly
/home/njh/perl5/perlbrew/perls/perl-5.8.4/lib/site_perl/5.8.4
/home/njh/perl5/perlbrew/perls/perl-5.8.4/lib/site_perl
.