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From: metabase:user:314402c4-2aae-11df-837a-5e0a49663a4f
Subject: FAIL BioX-Map-CLIS-0.0.6 v5.18.4 FreeBSD
Date: 2016-05-27T16:47:32Z
This distribution has been tested as part of the CPAN Testers
project, supporting the Perl programming language. See
http://wiki.cpantesters.org/ for more information or email
questions to cpan-testers-discuss@perl.org
--
Dear Yan Xueqing,
This is a computer-generated report for BioX-Map-CLIS-0.0.6
on perl 5.18.4, created by CPAN-Reporter-1.2016.
Thank you for uploading your work to CPAN. However, there was a problem
testing your distribution.
If you think this report is invalid, please consult the CPAN Testers Wiki
for suggestions on how to avoid getting FAIL reports for missing library
or binary dependencies, unsupported operating systems, and so on:
http://wiki.cpantesters.org/wiki/CPANAuthorNotes
Sections of this report:
* Tester comments
* Program output
* Prerequisites
* Environment and other context
------------------------------
TESTER COMMENTS
------------------------------
Additional comments from tester:
none provided
------------------------------
PROGRAM OUTPUT
------------------------------
Output from './Build test':
t/01-podsyntax.t .... ok
t/02-podcoverage.t .. ok
cat 512: /var/tmp/cpansmoker-1023/2016052715/B6bwZSdcwo/auto/share/dist/BioX-Map/exe/bwa: 3: Syntax error: word unexpected (expecting ")")
at /home/cpansand/.cpan/build/2016052715/BioX-Map-CLIS-0.0.6-8iO3XB/blib/lib/BioX/Map.pm line 145.
BioX::Map::create_index(BioX::Map=HASH(0x450789d8)) called at t/03-biox-map.t line 55
# Tests were run but no plan was declared and done_testing() was not seen.
# Looks like your test exited with 29 just after 18.
t/03-biox-map.t .....
Dubious, test returned 29 (wstat 7424, 0x1d00)
All 18 subtests passed
t/90-biox-map.t ..... ok
Test Summary Report
-------------------
t/03-biox-map.t (Wstat: 7424 Tests: 18 Failed: 0)
Non-zero exit status: 29
Parse errors: No plan found in TAP output
Files=4, Tests=30, 6 wallclock secs ( 0.10 usr 0.03 sys + 4.46 cusr 1.08 csys = 5.67 CPU)
Result: FAIL
Failed 1/4 test programs. 0/30 subtests failed.
------------------------------
PREREQUISITES
------------------------------
Prerequisite modules loaded:
requires:
Module Need Have
--------------------- ------ ----------
Carp 0 1.38
Cwd 0 3.60
File::ShareDir 1.00 1.102
File::Which 0 1.21
FindBin 0 1.51
IO::All 0 0.86
IPC::Run 0 0.94
lib 0 0.63
Modern::Perl 0 1.20150127
Moo 0 2.001001
MooX::Cmd 0 0.015
MooX::Options 0 4.021
Parallel::ForkManager 0 1.16
Types::Standard 0 1.000005
build_requires:
Module Need Have
--------------------- ------ ----------
Data::Dumper 0 2.154
Module::Build 0.3601 0.4218
Test::File::ShareDir 0 1.001001
Test::More 0 1.302015
Test::Pod 0 1.51
Test::Pod::Coverage 1.00 1.10
configure_requires:
Module Need Have
--------------------- ------ ----------
Module::Build 0.3601 0.4218
------------------------------
ENVIRONMENT AND OTHER CONTEXT
------------------------------
Environment variables:
LC_ALL = de_DE.ISO8859-1
PATH = /usr/local/bin:/usr/bin:/bin:/usr/local/sbin:/usr/sbin:/sbin:/home/cpansand/bin/freebsd10.1:/home/cpansand/bin/sh:/home/cpansand/bin:/usr/games:/home/cpansand/devel:/home/eserte/src/srezic-misc/scripts
PERL5LIB = /home/cpansand/.cpan/build/2016052715/Math-BivariateCDF-0.01_1-nRemnY/blib/arch:/home/cpansand/.cpan/build/2016052715/Math-BivariateCDF-0.01_1-nRemnY/blib/lib:/home/cpansand/.cpan/build/2016052715/Mail-Sender-0.900002-0OiImG/blib/arch:/home/cpansand/.cpan/build/2016052715/Mail-Sender-0.900002-0OiImG/blib/lib:/home/cpansand/.cpan/build/2016052715/HTML-FormFu-2.01_03-ldCkpm/blib/arch:/home/cpansand/.cpan/build/2016052715/HTML-FormFu-2.01_03-ldCkpm/blib/lib:/home/cpansand/.cpan/build/2016052715/Spreadsheet-ParseXLSX-0.22-XI0SjP/blib/arch:/home/cpansand/.cpan/build/2016052715/Spreadsheet-ParseXLSX-0.22-XI0SjP/blib/lib:/home/cpansand/.cpan/build/2016052715/Junkai-HUANG-Utils-0.01-lCABX9/blib/arch:/home/cpansand/.cpan/build/2016052715/Junkai-HUANG-Utils-0.01-lCABX9/blib/lib
PERL5OPT =
PERL5_CPANPLUS_IS_RUNNING = 91663
PERL5_CPAN_IS_RUNNING = 91663
PERL5_CPAN_IS_RUNNING_IN_RECURSION = 91624,91663
PERLDOC = -MPod::Perldoc::ToTextOverstrike
PERL_BATCH = yes
PERL_CANARY_STABILITY_NOPROMPT = 1
PERL_CPAN_REPORTER_CONFIG = /var/tmp/cpansmoker-1023/2016052715/cpanreporter_000_config.ini
PERL_EXTUTILS_AUTOINSTALL = --defaultdeps
SHELL = /usr/local/bin/zsh
TERM = screen
TMPDIR = /var/tmp/cpansmoker-1023/2016052715
Perl special variables (and OS-specific diagnostics, for MSWin32):
$^X = /usr/perl5.18.4p/bin/perl5.18.4
$UID/$EUID = 1023 / 1023
$GID = 1023 1023
$EGID = 1023 1023
Perl module toolchain versions installed:
Module Have
------------------- --------
CPAN 2.10
CPAN::Meta 2.150005
Cwd 3.60
ExtUtils::CBuilder 0.280224
ExtUtils::Command 7.14
ExtUtils::Install 1.59
ExtUtils::MakeMaker 7.14
ExtUtils::Manifest 1.70
ExtUtils::ParseXS 3.24
File::Spec 3.60
JSON 2.90
JSON::PP 2.27300
Module::Build 0.4218
Module::Signature 0.79
Parse::CPAN::Meta 1.4417
Test::Harness 3.35
Test::More 1.302015
YAML 1.15
YAML::Syck 1.29
version 0.9916
--
Summary of my perl5 (revision 5 version 18 subversion 4) configuration:
Platform:
osname=freebsd, osvers=10.1-release, archname=amd64-freebsd
uname='freebsd cvrsnica-freebsd-101.herceg.de 10.1-release freebsd 10.1-release #0 r274401: tue nov 11 21:02:49 utc 2014 root@releng1.nyi.freebsd.org:usrobjusrsrcsysgeneric amd64 '
config_args='-ds -e -Dprefix=/usr/perl5.18.4p'
hint=recommended, useposix=true, d_sigaction=define
useithreads=undef, usemultiplicity=undef
useperlio=define, d_sfio=undef, uselargefiles=define, usesocks=undef
use64bitint=define, use64bitall=define, uselongdouble=undef
usemymalloc=n, bincompat5005=undef
Compiler:
cc='cc', ccflags ='-DHAS_FPSETMASK -DHAS_FLOATINGPOINT_H -fno-strict-aliasing -pipe -fstack-protector -I/usr/local/include',
optimize='-O',
cppflags='-DHAS_FPSETMASK -DHAS_FLOATINGPOINT_H -fno-strict-aliasing -pipe -fstack-protector -I/usr/local/include'
ccversion='', gccversion='4.2.1 Compatible FreeBSD Clang 3.4.1 (tags/RELEASE_34/dot1-final 208032)', gccosandvers=''
intsize=4, longsize=8, ptrsize=8, doublesize=8, byteorder=12345678
d_longlong=define, longlongsize=8, d_longdbl=define, longdblsize=16
ivtype='long', ivsize=8, nvtype='double', nvsize=8, Off_t='off_t', lseeksize=8
alignbytes=8, prototype=define
Linker and Libraries:
ld='cc', ldflags ='-pthread -Wl,-E -fstack-protector -L/usr/local/lib'
libpth=/usr/lib /usr/local/lib
libs=-lgdbm -lm -lcrypt -lutil -lc
perllibs=-lm -lcrypt -lutil -lc
libc=, so=so, useshrplib=false, libperl=libperl.a
gnulibc_version=''
Dynamic Linking:
dlsrc=dl_dlopen.xs, dlext=so, d_dlsymun=undef, ccdlflags=' '
cccdlflags='-DPIC -fPIC', lddlflags='-shared -L/usr/local/lib -fstack-protector'
Characteristics of this binary (from libperl):
Compile-time options: HAS_TIMES PERLIO_LAYERS PERL_DONT_CREATE_GVSV
PERL_HASH_FUNC_ONE_AT_A_TIME_HARD PERL_MALLOC_WRAP
PERL_PRESERVE_IVUV PERL_SAWAMPERSAND USE_64_BIT_ALL
USE_64_BIT_INT USE_LARGE_FILES USE_LOCALE
USE_LOCALE_COLLATE USE_LOCALE_CTYPE
USE_LOCALE_NUMERIC USE_PERLIO USE_PERL_ATOF
Built under freebsd
Compiled at Apr 4 2015 13:03:15
%ENV:
PERL5LIB="/home/cpansand/.cpan/build/2016052715/Math-BivariateCDF-0.01_1-nRemnY/blib/arch:/home/cpansand/.cpan/build/2016052715/Math-BivariateCDF-0.01_1-nRemnY/blib/lib:/home/cpansand/.cpan/build/2016052715/Mail-Sender-0.900002-0OiImG/blib/arch:/home/cpansand/.cpan/build/2016052715/Mail-Sender-0.900002-0OiImG/blib/lib:/home/cpansand/.cpan/build/2016052715/HTML-FormFu-2.01_03-ldCkpm/blib/arch:/home/cpansand/.cpan/build/2016052715/HTML-FormFu-2.01_03-ldCkpm/blib/lib:/home/cpansand/.cpan/build/2016052715/Spreadsheet-ParseXLSX-0.22-XI0SjP/blib/arch:/home/cpansand/.cpan/build/2016052715/Spreadsheet-ParseXLSX-0.22-XI0SjP/blib/lib:/home/cpansand/.cpan/build/2016052715/Junkai-HUANG-Utils-0.01-lCABX9/blib/arch:/home/cpansand/.cpan/build/2016052715/Junkai-HUANG-Utils-0.01-lCABX9/blib/lib"
PERL5OPT=""
PERL5_CPANPLUS_IS_RUNNING="91663"
PERL5_CPAN_IS_RUNNING="91663"
PERL5_CPAN_IS_RUNNING_IN_RECURSION="91624,91663"
PERLDOC="-MPod::Perldoc::ToTextOverstrike"
PERL_BATCH="yes"
PERL_CANARY_STABILITY_NOPROMPT="1"
PERL_CPAN_REPORTER_CONFIG="/var/tmp/cpansmoker-1023/2016052715/cpanreporter_000_config.ini"
PERL_EXTUTILS_AUTOINSTALL="--defaultdeps"
@INC:
/home/cpansand/.cpan/build/2016052715/Math-BivariateCDF-0.01_1-nRemnY/blib/arch
/home/cpansand/.cpan/build/2016052715/Math-BivariateCDF-0.01_1-nRemnY/blib/lib
/home/cpansand/.cpan/build/2016052715/Mail-Sender-0.900002-0OiImG/blib/arch
/home/cpansand/.cpan/build/2016052715/Mail-Sender-0.900002-0OiImG/blib/lib
/home/cpansand/.cpan/build/2016052715/HTML-FormFu-2.01_03-ldCkpm/blib/arch
/home/cpansand/.cpan/build/2016052715/HTML-FormFu-2.01_03-ldCkpm/blib/lib
/home/cpansand/.cpan/build/2016052715/Spreadsheet-ParseXLSX-0.22-XI0SjP/blib/arch
/home/cpansand/.cpan/build/2016052715/Spreadsheet-ParseXLSX-0.22-XI0SjP/blib/lib
/home/cpansand/.cpan/build/2016052715/Junkai-HUANG-Utils-0.01-lCABX9/blib/arch
/home/cpansand/.cpan/build/2016052715/Junkai-HUANG-Utils-0.01-lCABX9/blib/lib
/usr/perl5.18.4p/lib/site_perl/5.18.4/amd64-freebsd
/usr/perl5.18.4p/lib/site_perl/5.18.4
/usr/perl5.18.4p/lib/5.18.4/amd64-freebsd
/usr/perl5.18.4p/lib/5.18.4
.