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From: metabase:user:e3434da8-b236-11df-85ca-0247c6d74bde
Subject: FAIL GeneDesign-Basic-3 v5.15.5 GNU/Linux
Date: 2011-11-30T18:30:59Z
This distribution has been tested as part of the CPAN Testers
project, supporting the Perl programming language. See
http://wiki.cpantesters.org/ for more information or email
questions to cpan-testers-discuss@perl.org
--
Dear Sarah Richardson,
This is a computer-generated report for GeneDesign-Basic-3
on perl 5.15.5, created by CPAN-Reporter-1.2002.
Thank you for uploading your work to CPAN. However, there was a problem
testing your distribution.
If you think this report is invalid, please consult the CPAN Testers Wiki
for suggestions on how to avoid getting FAIL reports for missing library
or binary dependencies, unsupported operating systems, and so on:
http://wiki.cpantesters.org/wiki/CPANAuthorNotes
Sections of this report:
* Tester comments
* Program output
* Prerequisites
* Environment and other context
------------------------------
TESTER COMMENTS
------------------------------
Additional comments from tester:
this report is from an automated smoke testing program
and was not reviewed by a human for accuracy
------------------------------
PROGRAM OUTPUT
------------------------------
Output from './Build test':
Illegal octal digit '9' ignored at /home/perl5155/.cpan/build/GeneDesign-Basic-3-MfMgqx/blib/lib/GeneDesign/HTML.pm line 491.
Illegal octal digit '9' ignored at /home/perl5155/.cpan/build/GeneDesign-Basic-3-MfMgqx/blib/lib/GeneDesign/HTML.pm line 533.
# Testing GeneDesign::Basic 3, Perl 5.015005, /home/perl5155/testing/bin/perl5.15.5
t/00-load.t ....... ok
t/manifest.t ...... skipped: Author tests not required for installation
Illegal octal digit '9' ignored at /home/perl5155/.cpan/build/GeneDesign-Basic-3-MfMgqx/blib/lib/GeneDesign/HTML.pm line 491.
Illegal octal digit '9' ignored at /home/perl5155/.cpan/build/GeneDesign-Basic-3-MfMgqx/blib/lib/GeneDesign/HTML.pm line 533.
# Failed test 'Pod coverage on GeneDesign::Codons'
# at /home/perl5155/testing/lib/site_perl/5.15.5/Test/Pod/Coverage.pm line 126.
# Coverage for GeneDesign::Codons is 90.9%, with 2 naked subroutines:
# combine
# sitver
# Failed test 'Pod coverage on GeneDesign::SufTree'
# at /home/perl5155/testing/lib/site_perl/5.15.5/Test/Pod/Coverage.pm line 126.
# Coverage for GeneDesign::SufTree is 75.0%, with 1 naked subroutine:
# root
# Looks like you failed 2 tests of 6.
t/pod-coverage.t ..
Dubious, test returned 2 (wstat 512, 0x200)
Failed 2/6 subtests
t/pod.t ........... ok
Test Summary Report
-------------------
t/pod-coverage.t (Wstat: 512 Tests: 6 Failed: 2)
Failed tests: 4-5
Non-zero exit status: 2
Files=4, Tests=18, 0 wallclock secs ( 0.04 usr 0.00 sys + 0.33 cusr 0.06 csys = 0.43 CPU)
Result: FAIL
Failed 1/4 test programs. 2/18 subtests failed.
------------------------------
PREREQUISITES
------------------------------
Prerequisite modules loaded:
requires:
Module Need Have
------------- --------- ---------
List::Util 0 1.23
perl 5.006 5.015005
Perl6::Slurp 0.03 0.03
Text::Wrap 2009.0305 2009.0305
build_requires:
Module Need Have
------------- --------- ---------
Test::More 0 0.98
configure_requires:
Module Need Have
------------- --------- ---------
Module::Build 0.38 0.39_01
------------------------------
ENVIRONMENT AND OTHER CONTEXT
------------------------------
Environment variables:
AUTOMATED_TESTING = 1
LANG = en_GB.utf8
LC_COLLATE = C
LC_MONETARY = nl_NL.utf8
PATH = /home/tester/perl5/perlbrew/bin:/home/tester/perl5/perlbrew/perls/perl-5.15.2/bin:/usr/lib64/qt-3.3/bin:/usr/lib64/ccache:/usr/local/bin:/bin:/usr/bin:/usr/local/sbin:/usr/sbin:/sbin:/home/tester/bin:/home/tester/bin
PATH_WITHOUT_PERLBREW = /usr/lib64/qt-3.3/bin:/usr/lib64/ccache:/usr/local/bin:/bin:/usr/bin:/usr/local/sbin:/usr/sbin:/sbin:/home/tester/bin
PERL5LIB = /home/perl5155/.cpan/build/BioPerl-1.6.901-2A_Os8/blib/arch:/home/perl5155/.cpan/build/BioPerl-1.6.901-2A_Os8/blib/lib:/home/perl5155/.cpan/build/Data-Stag-0.11-nMCk3A/blib/arch:/home/perl5155/.cpan/build/Data-Stag-0.11-nMCk3A/blib/lib:/home/perl5155/.cpan/build/IO-String-1.08-1Yx4Se/blib/arch:/home/perl5155/.cpan/build/IO-String-1.08-1Yx4Se/blib/lib:/home/perl5155/.cpan/build/Perl6-Slurp-0.03-9YyjNI/blib/arch:/home/perl5155/.cpan/build/Perl6-Slurp-0.03-9YyjNI/blib/lib:/home/perl5155/.cpan/build/Perl6-Export-0.07-4Ft7Cn/blib/arch:/home/perl5155/.cpan/build/Perl6-Export-0.07-4Ft7Cn/blib/lib
PERL5OPT =
PERL5_CPANPLUS_IS_RUNNING = 25361
PERL5_CPAN_IS_RUNNING = 25361
PERL5_CPAN_IS_RUNNING_IN_RECURSION = 18058,25361
PERLBREW_PATH = /home/tester/perl5/perlbrew/bin:/home/tester/perl5/perlbrew/perls/perl-5.15.2/bin
PERLBREW_PERL = perl-5.15.2
PERLBREW_ROOT = /home/tester/perl5/perlbrew
PERLBREW_VERSION = 0.15
PERL_CR_SMOKER_CURRENT = BioStudio-Basic-1.00
PERL_EXTUTILS_AUTOINSTALL = --defaultdeps
PERL_MM_USE_DEFAULT = 1
SHELL = /bin/bash
TERM = screen
Perl special variables (and OS-specific diagnostics, for MSWin32):
$^X = /home/perl5155/testing/bin/perl5.15.5
$UID/$EUID = 517 / 517
$GID = 517 517
$EGID = 517 517
Perl module toolchain versions installed:
Module Have
------------------- --------
CPAN 1.9800
CPAN::Meta 2.112621
Cwd 3.37
ExtUtils::CBuilder 0.280204
ExtUtils::Command 1.17
ExtUtils::Install 1.57
ExtUtils::MakeMaker 6.63_02
ExtUtils::Manifest 1.60
ExtUtils::ParseXS 3.05
File::Spec 3.34
JSON 2.53
JSON::PP 2.27200
Module::Build 0.39_01
Module::Signature n/a
Parse::CPAN::Meta 1.4401
Test::Harness 3.23
Test::More 0.98
YAML n/a
YAML::Syck 1.19
version 0.95
--
Summary of my perl5 (revision 5 version 15 subversion 5) configuration:
Platform:
osname=linux, osvers=2.6.38.8-35.fc15.x86_64, archname=x86_64-linux-thread-multi
uname='linux firenze.fritz.box 2.6.38.8-35.fc15.x86_64 #1 smp wed jul 6 13:58:54 utc 2011 x86_64 x86_64 x86_64 gnulinux '
config_args='-Dprefix=/home/perl5155/testing -Dusethreads -Dusedevel -des'
hint=recommended, useposix=true, d_sigaction=define
useithreads=define, usemultiplicity=define
useperlio=define, d_sfio=undef, uselargefiles=define, usesocks=undef
use64bitint=define, use64bitall=define, uselongdouble=undef
usemymalloc=n, bincompat5005=undef
Compiler:
cc='cc', ccflags ='-D_REENTRANT -D_GNU_SOURCE -fno-strict-aliasing -pipe -fstack-protector -I/usr/local/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64',
optimize='-O2',
cppflags='-D_REENTRANT -D_GNU_SOURCE -fno-strict-aliasing -pipe -fstack-protector -I/usr/local/include'
ccversion='', gccversion='4.6.0 20110530 (Red Hat 4.6.0-9)', gccosandvers=''
intsize=4, longsize=8, ptrsize=8, doublesize=8, byteorder=12345678
d_longlong=define, longlongsize=8, d_longdbl=define, longdblsize=16
ivtype='long', ivsize=8, nvtype='double', nvsize=8, Off_t='off_t', lseeksize=8
alignbytes=8, prototype=define
Linker and Libraries:
ld='cc', ldflags =' -fstack-protector -L/usr/local/lib'
libpth=/usr/local/lib /lib/../lib64 /usr/lib/../lib64 /lib /usr/lib /lib64 /usr/lib64 /usr/local/lib64
libs=-lnsl -lgdbm -ldb -ldl -lm -lcrypt -lutil -lpthread -lc -lgdbm_compat
perllibs=-lnsl -ldl -lm -lcrypt -lutil -lpthread -lc
libc=, so=so, useshrplib=false, libperl=libperl.a
gnulibc_version='2.14'
Dynamic Linking:
dlsrc=dl_dlopen.xs, dlext=so, d_dlsymun=undef, ccdlflags='-Wl,-E'
cccdlflags='-fPIC', lddlflags='-shared -O2 -L/usr/local/lib -fstack-protector'
Characteristics of this binary (from libperl):
Compile-time options: HAS_TIMES MULTIPLICITY PERLIO_LAYERS
PERL_DONT_CREATE_GVSV PERL_IMPLICIT_CONTEXT
PERL_MALLOC_WRAP PERL_PRESERVE_IVUV PERL_USE_DEVEL
USE_64_BIT_ALL USE_64_BIT_INT USE_ITHREADS
USE_LARGE_FILES USE_LOCALE USE_LOCALE_COLLATE
USE_LOCALE_CTYPE USE_LOCALE_NUMERIC USE_PERLIO
USE_PERL_ATOF USE_REENTRANT_API
Built under linux
Compiled at Nov 21 2011 09:58:14
%ENV:
PERL5LIB="/home/perl5155/.cpan/build/BioPerl-1.6.901-2A_Os8/blib/arch:/home/perl5155/.cpan/build/BioPerl-1.6.901-2A_Os8/blib/lib:/home/perl5155/.cpan/build/Data-Stag-0.11-nMCk3A/blib/arch:/home/perl5155/.cpan/build/Data-Stag-0.11-nMCk3A/blib/lib:/home/perl5155/.cpan/build/IO-String-1.08-1Yx4Se/blib/arch:/home/perl5155/.cpan/build/IO-String-1.08-1Yx4Se/blib/lib:/home/perl5155/.cpan/build/Perl6-Slurp-0.03-9YyjNI/blib/arch:/home/perl5155/.cpan/build/Perl6-Slurp-0.03-9YyjNI/blib/lib:/home/perl5155/.cpan/build/Perl6-Export-0.07-4Ft7Cn/blib/arch:/home/perl5155/.cpan/build/Perl6-Export-0.07-4Ft7Cn/blib/lib"
PERL5OPT=""
PERL5_CPANPLUS_IS_RUNNING="25361"
PERL5_CPAN_IS_RUNNING="25361"
PERL5_CPAN_IS_RUNNING_IN_RECURSION="18058,25361"
PERLBREW_PATH="/home/tester/perl5/perlbrew/bin:/home/tester/perl5/perlbrew/perls/perl-5.15.2/bin"
PERLBREW_PERL="perl-5.15.2"
PERLBREW_ROOT="/home/tester/perl5/perlbrew"
PERLBREW_VERSION="0.15"
PERL_CR_SMOKER_CURRENT="BioStudio-Basic-1.00"
PERL_EXTUTILS_AUTOINSTALL="--defaultdeps"
PERL_MM_USE_DEFAULT="1"
@INC:
/home/perl5155/.cpan/build/BioPerl-1.6.901-2A_Os8/blib/arch
/home/perl5155/.cpan/build/BioPerl-1.6.901-2A_Os8/blib/lib
/home/perl5155/.cpan/build/Data-Stag-0.11-nMCk3A/blib/arch
/home/perl5155/.cpan/build/Data-Stag-0.11-nMCk3A/blib/lib
/home/perl5155/.cpan/build/IO-String-1.08-1Yx4Se/blib/arch
/home/perl5155/.cpan/build/IO-String-1.08-1Yx4Se/blib/lib
/home/perl5155/.cpan/build/Perl6-Slurp-0.03-9YyjNI/blib/arch
/home/perl5155/.cpan/build/Perl6-Slurp-0.03-9YyjNI/blib/lib
/home/perl5155/.cpan/build/Perl6-Export-0.07-4Ft7Cn/blib/arch
/home/perl5155/.cpan/build/Perl6-Export-0.07-4Ft7Cn/blib/lib
/home/perl5155/testing/lib/site_perl/5.15.5/x86_64-linux-thread-multi
/home/perl5155/testing/lib/site_perl/5.15.5
/home/perl5155/testing/lib/5.15.5/x86_64-linux-thread-multi
/home/perl5155/testing/lib/5.15.5
.